RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF7P17097 686 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-204ENST00000561065 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.11
LMX1B-204ENST00000561065 PSMB4P28070 264 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 SPAM1P38567 509 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 MAPK9P45984 424 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 CHRNA6Q15825 494 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 SEPT7Q16181 437 aaKnown RBP15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ANKRD20A2Q5SQ80 823 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ANKRD20A1Q5TYW2 823 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ANKRD20A3Q5VUR7 823 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 FAM151BQ6UXP7 276 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ARHGEF18Q6ZSZ5 1173 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 GLT6D1Q7Z4J2 308 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 SLC9B2Q86UD5 537 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF843Q8N446 348 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.11
LMX1B-204ENST00000561065 AGBL5Q8NDL9 886 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ART4Q93070 314 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 FICDQ9BVA6 458 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 PKP3Q9Y446 797 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 PCDHGA3Q9Y5H0 932 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 ZNF462Q96JM2 2506 aa15.71■□□□□ 0.11
LMX1B-204ENST00000561065 C5orf60A6NFR6 353 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 C2orf81A6NN90 581 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 KMOO15229 486 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 VEGFDO43915 354 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A9O60656 530 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 CDK14O94921 469 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 AGTP01019 485 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A6P19224 532 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A1P22309 533 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A4P22310 534 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 ADRA1AP35348 466 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A3P35503 534 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 SLC19A1P41440 591 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 CTSCP53634 463 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 EPHA4P54764 986 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 GFERP55789 205 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 MN1Q10571 1320 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 LY6DQ14210 128 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 P3H1Q32P28 736 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 TAF1BQ53T94 588 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 SNAP47Q5SQN1 464 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 WDR74Q6RFH5 385 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 MICALCLQ6ZW33 695 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 ARHGAP22Q7Z5H3 698 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 JPH3Q8WXH2 748 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 AHCYL2Q96HN2 611 aaKnown RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 SPATA13Q96N96 652 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 DPYSL5Q9BPU6 564 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 APOL2Q9BQE5 337 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 STN1Q9H668 368 aaKnown RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A7Q9HAW7 530 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A10Q9HAW8 530 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 UGT1A8Q9HAW9 530 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 LZTFL1Q9NQ48 299 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 AKAP7Q9P0M2 348 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 ARL5AQ9Y689 179 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 SLC30A1Q9Y6M5 507 aa15.7■□□□□ 0.1
LMX1B-204ENST00000561065 HELZ2Q9BYK8 2649 aaKnown RBP15.7■□□□□ 0.1
LMX1B-204ENST00000561065 GLYATL1P3A0A0U1RQE8 302 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 OR52A4PA6NMU1 304 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 EFCAB7A8K855 629 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 A8MU76 341 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 DDX3YO15523 660 aaKnown RBP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 ZSCAN12O43309 604 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 GAS8O95995 478 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 SLC2A4P14672 509 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 RPL10P27635 214 aaKnown RBP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 CD82P27701 267 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 CSTF2P33240 577 aaKnown RBP eCLIP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 DRG2P55039 364 aaKnown RBP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 TMEM115Q12893 351 aaPredicted RBP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 MSLNQ13421 630 aaPredicted RBP15.69■□□□□ 0.1
LMX1B-204ENST00000561065 PARP6Q2NL67 630 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 GPRC6AQ5T6X5 926 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 ANKS6Q68DC2 871 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 FAM129CQ86XR2 697 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 TRAPPC5Q8IUR0 188 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 DDHD1Q8NEL9 900 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 CCDC110Q8TBZ0 833 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 DTX3LQ8TDB6 740 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 BRSK1Q8TDC3 778 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 NAT14Q8WUY8 206 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 NCSTNQ92542 709 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 TTC25Q96NG3 672 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 TAAR9Q96RI9 348 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 HOMER3Q9NSC5 361 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 KLHL3Q9UH77 587 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 WDR37Q9Y2I8 494 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 KCTD3Q9Y597 815 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 PCDHGA4Q9Y5G9 962 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
LMX1B-204ENST00000561065 PDZK1P1A8MUH7 402 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms