RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FCHO2Q0JRZ9 810 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 MBOAT1Q6ZNC8 495 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 OR52K2Q8NGK3 314 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PIH1D2Q8WWB5 315 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 IPCEF1Q8WWN9 437 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 HERVK_113Q902F9 699 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TOP1MTQ969P6 601 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CENPNQ96H22 339 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CEP295NLQ96MC4 621 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PLEKHG4BQ96PX9 1271 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TUBGCP5Q96RT8 1024 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 SLC29A3Q9BZD2 475 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 EPB41L1Q9H4G0 881 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 DUS2Q9NX74 493 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 STOML2Q9UJZ1 356 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 A0A0X1KG70 313 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CD247P20963 164 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 GSTM3P21266 225 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TAS2R40P59535 323 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PDGFRLQ15198 375 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 LACTB2Q53H82 288 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PDE12Q6L8Q7 609 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF730Q6ZMV8 503 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ARHGAP22Q7Z5H3 698 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PACRGLQ8N7B6 248 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PSMA8Q8TAA3 256 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 DEFB118Q96PH6 123 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 IL12RB2Q99665 862 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 NOL11Q9H8H0 719 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CD320Q9NPF0 282 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 C1orf109Q9NX04 203 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TAS2R7Q9NYW3 318 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PCDHGB2Q9Y5G2 931 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 TLL2Q9Y6L7 1015 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ATRNL1Q5VV63 1379 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 MRC1P22897 1456 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 SPTLC1O15269 473 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 RGS10O43665 173 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ITPKBP27987 946 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 LILRA4P59901 499 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CLCQ05315 142 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 FOXM1Q08050 763 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 DPYSL2Q16555 572 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 C5orf22Q49AR2 442 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 C10orf107Q8IVU9 208 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 RASGEF1AQ8N9B8 481 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 PEX13Q92968 403 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 CLPTM1LQ96KA5 538 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
ACTN1-216ENST00000556083 RBM7Q9Y580 266 aaKnown RBP10.62□□□□□ -0.71
ACTN1-216ENST00000556083 C2CD4BA6NLJ0 364 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 RHPN2P1A8MT19 583 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 BTBD19C9JJ37 291 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 H0Y858 1186 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TOP3BO95985 862 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ANXA4P09525 319 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GSTT2BP0CG30 244 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CTSKP43235 329 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 BRCC3P46736 316 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TXNL4AP83876 142 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CTBP1Q13363 440 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 SEMA5AQ13591 1074 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TTMPQ5BVD1 217 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TMEM164Q5U3C3 297 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GLYATQ6IB77 296 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CRYBG2Q8N1P7 616 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 KREMEN1Q96MU8 473 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 IPPKQ9H8X2 491 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GTF2IRD1Q9UHL9 959 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 POLR3HQ9Y535 204 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PEX16Q9Y5Y5 336 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TMEM150CB9EJG8 249 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 B3GALT2O43825 422 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 HRH2P25021 359 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CASRP41180 1078 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 JAM2P57087 298 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 GHRHRQ02643 423 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 RALGDSQ12967 914 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 TAF5Q15542 800 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
ACTN1-216ENST00000556083 NUP54Q7Z3B4 507 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ARL10Q8N8L6 244 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 C1orf127Q8N9H9 656 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 LCN9Q8WX39 176 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 AGAP2Q99490 1192 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 CCM2Q9BSQ5 444 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 ZSCAN5AQ9BUG6 496 aa10.61□□□□□ -0.71
ACTN1-216ENST00000556083 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms