RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PTGIRP43119 386 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 DR1Q01658 176 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 ACVR1Q04771 509 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 DHX34Q14147 1143 aaKnown RBP17.08■□□□□ 0.32
CDK4-208ENST00000551706 INSCQ1MX18 579 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 C14orf28Q4W4Y0 310 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 ZRANB3Q5FWF4 1079 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 GUSBP11Q6P575 273 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 CRTC3Q6UUV7 619 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 ZNF534Q76KX8 674 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
CDK4-208ENST00000551706 PPIL6Q8IXY8 311 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 IFI44Q8TCB0 444 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 ZDHHC1Q8WTX9 485 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDK4-208ENST00000551706 COPS8Q99627 209 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 MRM3Q9HC36 420 aaKnown RBP17.08■□□□□ 0.32
CDK4-208ENST00000551706 PLEKHM1Q9Y4G2 1056 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 PCYT1BQ9Y5K3 369 aaPredicted RBP17.08■□□□□ 0.32
CDK4-208ENST00000551706 ST14Q9Y5Y6 855 aa17.08■□□□□ 0.32
CDK4-208ENST00000551706 DNMT3AQ9Y6K1 912 aaPredicted RBP17.08■□□□□ 0.32
CDK4-208ENST00000551706 TRBV5-4A0A0C4DH59 114 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 CCDC78A2IDD5 438 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 CPED1A4D0V7 1026 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 KLHL33A6NCF5 533 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 KIF2AO00139 706 aaPredicted RBP17.07■□□□□ 0.32
CDK4-208ENST00000551706 NOBOXO60393 691 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 MYF5P13349 255 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 SLC2A4P14672 509 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 GLB1P16278 677 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 ARSDP51689 593 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 TERF1P54274 439 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 PRAMEP78395 509 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 ANKRD22Q5VYY1 191 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 AFTPHQ6ULP2 937 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 DHRS13Q6UX07 377 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 LRRC69Q6ZNQ3 347 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 RASGEF1AQ8N9B8 481 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 NAT8LQ8N9F0 302 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 OR13J1Q8NGT2 312 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 SGSM3Q96HU1 749 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 FCRL3Q96P31 734 aaPredicted RBP17.07■□□□□ 0.32
CDK4-208ENST00000551706 TTC1Q99614 292 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 ZDHHC3Q9NYG2 299 aa17.07■□□□□ 0.32
CDK4-208ENST00000551706 CCDC162PA2VCL2 907 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 DNALI1O14645 258 aaPredicted RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 NUDT21O43809 227 aaKnown RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 TMEM63AO94886 807 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 PNLIPP16233 465 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 ZNF7P17097 686 aaPredicted RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 ACRV1P26436 265 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 MGAT1P26572 445 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 CA5AP35218 305 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 CFHR1Q03591 330 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 BIRC2Q13490 618 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDK4-208ENST00000551706 SMAD1Q15797 465 aaKnown RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 KCTD19Q17RG1 926 aaPredicted RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 LYPLAL1Q5VWZ2 237 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 TMEM220Q6QAJ8 160 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 TAS2R42Q7RTR8 314 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 HOOK3Q86VS8 718 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 SERPINA9Q86WD7 417 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 TMPRSS12Q86WS5 348 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 C17orf82Q86X59 251 aaPredicted RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 JAMLQ86YT9 394 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 ZNF547Q8IVP9 402 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 SPATA4Q8NEY3 305 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 WDR48Q8TAF3 677 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 HDAC10Q969S8 669 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 ZNF778Q96MU6 729 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 SERPINB12Q96P63 405 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 KIFC1Q9BW19 673 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 ABCG4Q9H172 646 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 FAM96AQ9H5X1 160 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 CHRAC1Q9NRG0 131 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
CDK4-208ENST00000551706 KCNK6Q9Y257 313 aa17.06■□□□□ 0.32
CDK4-208ENST00000551706 ZNF106Q9H2Y7 1883 aaKnown RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 IGLV3-16A0A075B6K0 115 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 SDR42E2A6NKP2 422 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 OR5K4A6NMS3 321 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 SMAPO00193 183 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 NDC80O14777 642 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 ATP1B2P14415 290 aaPredicted RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 FOXN2P32314 431 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 PPARGP37231 505 aaPredicted RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 EIF2S3P41091 472 aaKnown RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 CTSCP53634 463 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 CRADDP78560 199 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 DMPKQ09013 629 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 ITIH4Q14624 930 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 BCL7AQ4VC05 210 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 RNASEH2BQ5TBB1 312 aaKnown RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 CERS6Q6ZMG9 384 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 CAND1Q86VP6 1230 aaKnown RBP17.05■□□□□ 0.32
CDK4-208ENST00000551706 AMZ2Q86W34 360 aa17.05■□□□□ 0.32
CDK4-208ENST00000551706 NAGSQ8N159 534 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms