RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TJP3O95049 919 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 NDUFA10O95299 355 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 C9P02748 559 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 LPOP22079 712 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 CTNNA1P35221 906 aaKnown RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 PTPN7P35236 360 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC19A1P41440 591 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 RWDD2BP57060 319 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 MC1RQ01726 317 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 DMPKQ09013 629 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 MAP7Q14244 749 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 IL11RAQ14626 422 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 LONRF2Q1L5Z9 754 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF648Q5T619 568 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 VASH2Q86V25 355 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 BPHLQ86WA6 291 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 TRAPPC5Q8IUR0 188 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF547Q8IVP9 402 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 TTC30BQ8N4P2 665 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC25A41Q8N5S1 370 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 DDHD1Q8NEL9 900 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 BLOC1S5Q8TDH9 187 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 HEXDCQ8WVB3 486 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 UBE2Q2Q8WVN8 375 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 CXorf40BQ96DE9 158 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 RTP4Q96DX8 246 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 OXNAD1Q96HP4 312 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 C9orf72Q96LT7 481 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 RAB33BQ9H082 229 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 GBA3Q9H227 469 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ADNPQ9H2P0 1102 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC40A1Q9NP59 571 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARFGAP3Q9NP61 516 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 SMOXQ9NWM0 555 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF624Q9P2J8 865 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 EPHA6Q9UF33 1036 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC23A2Q9UGH3 650 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 FEZ2Q9UHY8 353 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 PILRAQ9UKJ1 303 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 DNAJC16Q9Y2G8 782 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 TMEM184BQ9Y519 407 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 MGAQ8IWI9 3026 aa10.7□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF891A8MT65 544 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 MTX2O75431 263 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 POP7O75817 140 aaKnown RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 CRTAMO95727 393 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 RALBP11234 206 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ADCY2Q08462 1091 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ABHD18Q0P651 414 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 NOMO1Q15155 1222 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 LLGL1Q15334 1064 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TAF1AQ15573 450 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 CHRNA6Q15825 494 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TBR1Q16650 682 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 LINC00303Q3SY05 128 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TMEM220Q6QAJ8 160 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 SYCE1Q8N0S2 351 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ESX1Q8N693 406 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TTC13Q8NBP0 860 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF398Q8TD17 642 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 EXTL1Q92935 676 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC45A3Q96JT2 553 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TBC1D10AQ9BXI6 508 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 SLC12A9Q9BXP2 914 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 OSBPL8Q9BZF1 889 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 SPRY4Q9C004 299 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 GOLPH3Q9H4A6 298 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 SCHIP1Q9P0W5 487 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 TMPRSS11EQ9UL52 423 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ACSL5Q9ULC5 683 aa10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 HEMK1Q9Y5R4 338 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 HELZ2Q9BYK8 2649 aaKnown RBP10.69□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF462Q96JM2 2506 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 SPTA1P02549 2419 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 GOLGA6L9A6NEM1 432 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 STK17BO94768 372 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 PTMAP06454 111 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 RBP3P10745 1247 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 MSH3P20585 1137 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 FECHP22830 423 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 RPL10P27635 214 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 RBL1P28749 1068 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 HADHAP40939 763 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 CHRNA4P43681 627 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 CAPZBP47756 277 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 ARSDP51689 593 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 ZNF75DP51815 510 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 EIF3EP60228 445 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 SEPT7Q16181 437 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 PLA2G4EQ3MJ16 856 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 GPRC6AQ5T6X5 926 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 BORAQ6PGQ7 559 aa10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 DARS2Q6PI48 645 aaKnown RBP10.68□□□□□ -0.7
VTI1BP3-201ENST00000550220 FAM151BQ6UXP7 276 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms