RNA–Protein interactions for RNA: ENST00000540205.1

MAP3K4-210, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 4

Gene MAP3K4, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-210	ENST00000540205	FUBP1	Q96AE4	644 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SGF29	Q96ES7	293 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	BMF	Q96LC9	184 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	LGR4	Q9BXB1	951 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	OR2AG1	Q9H205	316 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GPAM	Q9HCL2	828 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SSU72	Q9NP77	194 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	LATS2	Q9NRM7	1088 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	PCMTD2	Q9NV79	361 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TRMT6	Q9UJA5	497 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GPR34	Q9UPC5	381 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ANKRD6	Q9Y2G4	727 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	VCAN	P13611	3396 aa		13.54	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ZDBF2	Q9HCK1	2354 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	OR2AG2	A6NM03	316 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	IQCF5	A8MTL0	148 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	KPNA5	O15131	536 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	PHGDH	O43175	533 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TRIM16	O95361	564 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GSTM1	P09488	218 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SLC35E2B	P0CK96	405 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	COL6A2	P12110	1019 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	BRAF	P15056	766 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ZNF8	P17098	575 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	BCKDHB	P21953	392 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	HTR1B	P28222	390 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SLC26A3	P40879	764 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	PRLHR	P49683	370 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GSTM4	Q03013	218 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	PDE1C	Q14123	709 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	NFATC4	Q14934	902 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ZNF528	Q3MIS6	628 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	BCL7A	Q4VC05	210 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	DOK6	Q6PKX4	331 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TMEM220	Q6QAJ8	160 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SH2D5	Q6ZV89	423 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	LPCAT2	Q7L5N7	544 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	MTERF4	Q7Z6M4	381 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ABI3BP	Q7Z7G0	1075 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	LCA5	Q86VQ0	697 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	KRT222	Q8N1A0	295 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	C4orf33	Q8N1A6	199 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	DEFB119	Q8N690	84 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GAB3	Q8WWW8	586 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	HSPA12B	Q96MM6	686 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TSNARE1	Q96NA8	513 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	GPR21	Q99679	349 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ORAI3	Q9BRQ5	295 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	VPS11	Q9H270	941 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	RMI1	Q9H9A7	625 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SYTL2	Q9HCH5	934 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	MKS1	Q9NXB0	559 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	KLHL42	Q9P2K6	505 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	MED16	Q9Y2X0	877 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	TMEM98	Q9Y2Y6	226 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ACOT9	Q9Y305	439 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	DHRS7	Q9Y394	339 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	BDP1	A6H8Y1	2624 aa		13.53	□□□□□ -0.24
MAP3K4-210	ENST00000540205	ZFC3H1	O60293	1989 aa	Known RBP	13.52	□□□□□ -0.24
MAP3K4-210	ENST00000540205	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205		H0Y8X5	98 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	COPE	O14579	308 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CHUK	O15111	745 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	SGTA	O43765	313 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	NUAK1	O60285	661 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	GLRA3	O75311	464 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	GSTA1	P08263	222 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	ITGB6	P18564	788 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CNR2	P34972	360 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CCT5	P48643	541 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CLCN7	P51798	805 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CTSC	P53634	463 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	PTK2B	Q14289	1009 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	ZNF460	Q14592	562 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	TTLL9	Q3SXZ7	439 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	PPM1J	Q5JR12	505 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	WDR45B	Q5MNZ6	344 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	KDM7A	Q6ZMT4	941 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205		Q6ZSR6	202 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	OTOA	Q7RTW8	1153 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	PIM3	Q86V86	326 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	TRAPPC5	Q8IUR0	188 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	TMEFF1	Q8IYR6	380 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	NKAP	Q8N5F7	415 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	BANP	Q8N9N5	519 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	SIDT2	Q8NBJ9	832 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CD200R1	Q8TD46	325 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	NAT14	Q8WUY8	206 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	INPP5D	Q92835	1189 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	FAM136A	Q96C01	138 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	APOPT1	Q96IL0	206 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	LINC00615	Q96LM1	132 aa	Predicted RBP	13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	WDR92	Q96MX6	357 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	CCM2	Q9BSQ5	444 aa		13.52	□□□□□ -0.25
MAP3K4-210	ENST00000540205	SLC13A1	Q9BZW2	595 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms