RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 INO80DQ53TQ3 878 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 UBE2R2Q712K3 238 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 TMPRSS11BQ86T26 416 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 IGDCC3Q8IVU1 814 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 MAPK15Q8TD08 544 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 RUBCNQ92622 972 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 CENPIQ92674 756 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 FAM129BQ96TA1 746 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 TBC1D10AQ9BXI6 508 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 COG4Q9H9E3 785 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 SUSD2Q9UGT4 822 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 MBD1Q9UIS9 605 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 MAFFQ9ULX9 164 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 MED12Q93074 2177 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 TCRBV9S1A1TA0A576 114 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 NPEPPSL1A6NEC2 478 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 A8MUI8 341 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 RAP1GDS1P52306 607 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 IL2P60568 153 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 CASP8Q14790 479 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SUZ12Q15022 739 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 PAFAH1B3Q15102 231 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 HLA-BQ31612 363 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 TSTD2Q5T7W7 516 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SLC9A4Q6AI14 798 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 PAQR3Q6TCH7 311 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 ZSWIM9Q86XI8 627 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 NIPA2Q8N8Q9 360 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 THAP3Q8WTV1 239 aaPredicted RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 DPYSL5Q9BPU6 564 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SYT11Q9BT88 431 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 APOOQ9BUR5 198 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 TRABDQ9H4I3 376 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SLC2A4RGQ9NR83 387 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 UCKL1Q9NWZ5 548 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 KCNK4Q9NYG8 393 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 RCOR3Q9P2K3 495 aaPredicted RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 HSFX1Q9UBD0 423 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 ANKRD6Q9Y2G4 727 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SLC27A6Q9Y2P4 619 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 MTO1Q9Y2Z2 717 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 PSAT1Q9Y617 370 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 EIF4E1BA6NMX2 242 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 TLR4O00206 839 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 CASC3O15234 703 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 AKAP10O43572 662 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 IFNA16P05015 189 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 ENGP17813 658 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 PDHA2P29803 388 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 EPHA5P54756 1037 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 TOMM20Q15388 145 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 FAM180BQ6P0A1 224 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 METTL3Q86U44 580 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 LRRC49Q8IUZ0 686 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 NUDCD3Q8IVD9 361 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 WDR75Q8IWA0 830 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 PELI3Q8N2H9 469 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SLC35B2Q8TB61 432 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 HNRNPLLQ8WVV9 542 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 GLYATL1Q969I3 302 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SCRN2Q96FV2 425 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 FCRL5Q96RD9 977 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SRPK1Q96SB4 655 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 PHOX2BQ99453 314 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 WWP1Q9H0M0 922 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 USP29Q9HBJ7 922 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 LRIT1Q9P2V4 623 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 LHX3Q9UBR4 397 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 DNAH14Q0VDD8 3507 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 GNG14A0A1W2PPG7 69 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 OR6C74A6NCV1 312 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 DRGXA6NNA5 263 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 CYP7B1O75881 506 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 ABCB1P08183 1280 aaPredicted RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 PKMP14618 531 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 GGT5P36269 586 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SCNN1AP37088 669 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 HSPA7P48741 367 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 TAS2R39P59534 338 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 HHEXQ03014 270 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 MORF4L2Q15014 288 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 TSNQ15631 228 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 DNAJC14Q6Y2X3 702 aaPredicted RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 Q6ZNB5 142 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SYT13Q7L8C5 426 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 OR56A4Q8NGH8 313 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 FAM122AQ96E09 287 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 EBNA1BP2Q99848 306 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 OSBPL1AQ9BXW6 950 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 PABPC3Q9H361 631 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 TM9SF3Q9HD45 589 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 INTS9Q9NV88 658 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 NINJ2Q9NZG7 142 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 PPM1HQ9ULR3 514 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 MAU2Q9Y6X3 613 aa7.14□□□□□ -1.27
MSH6-209ENST00000538136 SONP18583 2426 aaKnown RBP7.14□□□□□ -1.27
MSH6-209ENST00000538136 CXorf49A8MYA2 514 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 C9JVG2 144 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms