RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TBC1D10AQ9BXI6 508 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 FSD1LQ9BXM9 530 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CPNE5Q9HCH3 593 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 WASH6PQ9NQA3 447 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CPNE7Q9UBL6 633 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PISDQ9UG56 409 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 ACSL6Q9UKU0 697 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 DNAJC16Q9Y2G8 782 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 WDR37Q9Y2I8 494 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PKP3Q9Y446 797 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 SLC30A1Q9Y6M5 507 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 ZFC3H1O60293 1989 aaKnown RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 C2orf81A6NN90 581 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 C9orf172C9J069 976 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 LDB2O43679 373 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 SGTAO43765 313 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 KRT86O43790 486 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 KCNJ13O60928 360 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 SRP72O76094 671 aaKnown RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 STK10O94804 968 aaKnown RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TPH1P17752 444 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 IDSP22304 550 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 RPL10P27635 214 aaKnown RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 STIP1P31948 543 aaKnown RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 CSF2RBP32927 897 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 MAPK10P53779 464 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 GSDMDP57764 484 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 INSCQ1MX18 579 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 MAP9Q49MG5 647 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 LDLRAP1Q5SW96 308 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 GPRC6AQ5T6X5 926 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 MEI1Q5TIA1 1274 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 WDR74Q6RFH5 385 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 DNAJC14Q6Y2X3 702 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-215ENST00000519474 ZNF662Q6ZS27 426 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 MICALCLQ6ZW33 695 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 GPR155Q7Z3F1 870 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 ZFAND4Q86XD8 727 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 LRRC8AQ8IWT6 810 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 DDHD1Q8NEL9 900 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 OR13C4Q8NGS5 318 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 GDAP1Q8TB36 358 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 SGF29Q96ES7 293 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 CCDC74BQ96LY2 380 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TTC25Q96NG3 672 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TAAR9Q96RI9 348 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 DPYSL5Q9BPU6 564 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TBL1YQ9BQ87 522 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 TMEM121Q9BTD3 319 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 SPRY4Q9C004 299 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 B3GNT4Q9C0J1 378 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 OSGEPL1Q9H4B0 414 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 ASB8Q9H765 288 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 UCK1Q9HA47 277 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 OCIAD1Q9NX40 245 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
HDAC3-215ENST00000519474 A8MU76 341 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 HGSO14964 777 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 ARHGAP6O43182 974 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 PSMD3O43242 534 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 PRAMEF10O60809 474 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 CRTAMO95727 393 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 THRAP10827 490 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 SLC2A4P14672 509 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 CDKN1CP49918 316 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 CXADRP78310 365 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 TMPRSS15P98073 1019 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 DMPKQ09013 629 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 ITGA9Q13797 1035 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 ARHGAP40Q5TG30 622 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 BROXQ5VW32 411 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 METRNLQ641Q3 311 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 PCSK4Q6UW60 755 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 XKR5Q6UX68 686 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 FAM83HQ6ZRV2 1179 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 TMEM26Q6ZUK4 368 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 AMZ2Q86W34 360 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 DTX1Q86Y01 620 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 SLC13A5Q86YT5 568 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 AGBL5Q8NDL9 886 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 OR10G6Q8NH81 332 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 NAT14Q8WUY8 206 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 C1orf54Q8WWF1 131 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 AHCYL2Q96HN2 611 aaKnown RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 FCRL3Q96P31 734 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 C19orf43Q9BQ61 176 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-215ENST00000519474 FAM96AQ9H5X1 160 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 SLC40A1Q9NP59 571 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 FOXJ2Q9P0K8 574 aa9.18□□□□□ -0.94
HDAC3-215ENST00000519474 FKBPLQ9UIM3 349 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms