RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 POT1Q9NUX5 634 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 OCIAD1Q9NX40 245 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF624Q9P2J8 865 aaPredicted RBP10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 B3GALT1Q9Y5Z6 326 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 ARL5AQ9Y689 179 aa10.29□□□□□ -0.76
HMGXB3-205ENST00000514469 ZFC3H1O60293 1989 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 BAHCC1Q9P281 2608 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PDZK1P1A8MUH7 402 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 KCNN4O15554 427 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 BUD23O43709 281 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A9O60656 530 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 KCNJ13O60928 360 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF189O75820 626 aaPredicted RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 STK10O94804 968 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 TJP3O95049 919 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PRAMEF1O95521 474 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 VIPP01282 170 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 C9P02748 559 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 VCLP18206 1134 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A6P19224 532 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A1P22309 533 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A4P22310 534 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 CDC25BP30305 580 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A3P35503 534 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC19A1P41440 591 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 MAPK9P45984 424 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 CAPZBP47756 277 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PPM1FP49593 454 aaPredicted RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 CTSCP53634 463 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 GFERP55789 205 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 OLIG2Q13516 323 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 MANEAQ5SRI9 462 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 GPRC6AQ5T6X5 926 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 TMEM26Q6ZUK4 368 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 FAM129CQ86XR2 697 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 RBM12BQ8IXT5 1001 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 ZNF843Q8N446 348 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 RASGEF1AQ8N9B8 481 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SGF29Q96ES7 293 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PPP1R2P1Q96PQ5 205 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 TEFMQ96QE5 360 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 ASPSCR1Q9BZE9 553 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A7Q9HAW7 530 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A10Q9HAW8 530 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 UGT1A8Q9HAW9 530 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SIDT1Q9NXL6 827 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 SLC39A1Q9NY26 324 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 AAR2Q9Y312 384 aaKnown RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 ARHGEF17Q96PE2 2063 aaPredicted RBP10.28□□□□□ -0.76
HMGXB3-205ENST00000514469 A0A0U1RQJ8 604 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 OR52A4PA6NMU1 304 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 A8MU76 341 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 MIF4GDA9UHW6 222 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DDX3YO15523 660 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 UBXN7O94888 489 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 WT1P19544 449 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 LPOP22079 712 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 IDSP22304 550 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 RPL10P27635 214 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 CETN2P41208 172 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 ZNF140P52738 457 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DRG2P55039 364 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 MC2RQ01718 297 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 KLF1Q13351 362 aaPredicted RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 LY6DQ14210 128 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 GPR18Q14330 331 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 PRPSAP1Q14558 356 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 PTPRCAPQ14761 206 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 CLCA4Q14CN2 919 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 SNAP47Q5SQN1 464 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DCAF12Q5T6F0 453 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 ANKS6Q68DC2 871 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DENND5AQ6IQ26 1287 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DARS2Q6PI48 645 aaKnown RBP10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 PEX26Q7Z412 305 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 PLXDC1Q8IUK5 500 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 TRIM48Q8IWZ4 208 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 SYCE1Q8N0S2 351 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 TXLNBQ8N3L3 684 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 UBL4BQ8N7F7 174 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 NKD1Q969G9 470 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 RTP4Q96DX8 246 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 C19orf43Q9BQ61 176 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 TBL1YQ9BQ87 522 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 APOL2Q9BQE5 337 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 DESI2Q9BSY9 194 aa10.27□□□□□ -0.77
HMGXB3-205ENST00000514469 SPRY4Q9C004 299 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms