RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 ASCL3Q9NQ33 180 aa16.6■□□□□ 0.25
SMN2-210ENST00000511812 PAK5Q9P286 719 aa16.6■□□□□ 0.25
SMN2-210ENST00000511812 PISDQ9UG56 409 aa16.6■□□□□ 0.25
SMN2-210ENST00000511812 LHX6Q9UPM6 363 aa16.6■□□□□ 0.25
SMN2-210ENST00000511812 DNMT3AQ9Y6K1 912 aaPredicted RBP16.6■□□□□ 0.25
SMN2-210ENST00000511812 ANKRD11Q6UB99 2663 aaPredicted RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 A0A1W2PNU3 283 aaPredicted RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 LDB2O43679 373 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 POP7O75817 140 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 XRCC1P18887 633 aaPredicted RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 RPL10P27635 214 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 MC4RP32245 332 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 MAPK9P45984 424 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 CTSCP53634 463 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 FNBP1LQ5T0N5 605 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 SNX20Q7Z614 316 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 JAMLQ86YT9 394 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 OR4D9Q8NGE8 314 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 STYXQ8WUJ0 223 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 HEXDCQ8WVB3 486 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 KCNE4Q8WWG9 221 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 CXorf40BQ96DE9 158 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 CCDC97Q96F63 343 aaPredicted RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 DNAJC1Q96KC8 554 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 HOMER3Q9NSC5 361 aa16.59■□□□□ 0.25
SMN2-210ENST00000511812 PIH1D1Q9NWS0 290 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 DRG1Q9Y295 367 aaKnown RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 COL27A1Q8IZC6 1860 aaPredicted RBP16.59■□□□□ 0.25
SMN2-210ENST00000511812 ASPMQ8IZT6 3477 aa16.58■□□□□ 0.25
SMN2-210ENST00000511812 PMS2P1A4D2B8 440 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 HGFP14210 728 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 ETS1P14921 441 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 PBLDP30039 288 aaPredicted RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 CXCR5P32302 372 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 LIMK2P53671 638 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 EPHA4P54764 986 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 DRG2P55039 364 aaKnown RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 XIAPP98170 497 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 SQSTM1Q13501 440 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 TRA2AQ13595 282 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMN2-210ENST00000511812 LAMB3Q13751 1172 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 SKIDA1Q1XH10 827 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 COL28A1Q2UY09 1125 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 GPR33Q49SQ1 333 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 ZRANB3Q5FWF4 1079 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 TMEM71Q6P5X7 295 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 DRICH1Q6PGQ1 229 aaPredicted RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 ABRAXAS1Q6UWZ7 409 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 C4orf22Q6V702 233 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 DET1Q7L5Y6 550 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 TAS2R42Q7RTR8 314 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 TMPRSS9Q7Z410 1059 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 C11orf96Q7Z7L8 435 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 OR52K1Q8NGK4 314 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 PRR11Q96HE9 360 aaPredicted RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 CCDC74BQ96LY2 380 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 COPS8Q99627 209 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 EPB41L1Q9H4G0 881 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 WASH6PQ9NQA3 447 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 NLE1Q9NVX2 485 aaPredicted RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.58■□□□□ 0.24
SMN2-210ENST00000511812 JRKLQ9Y4A0 524 aa16.58■□□□□ 0.24
SMN2-210ENST00000511812 KIF26BQ2KJY2 2108 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 CDRT15L2A8MXV6 281 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 CCL22O00626 93 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 HGSO14964 777 aaPredicted RBP16.57■□□□□ 0.24
SMN2-210ENST00000511812 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
SMN2-210ENST00000511812 CSTF2P33240 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMN2-210ENST00000511812 CA5AP35218 305 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 MAPK10P53779 464 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 UBE2IP63279 158 aaKnown RBP16.57■□□□□ 0.24
SMN2-210ENST00000511812 DMPKQ09013 629 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 SIX1Q15475 284 aaPredicted RBP16.57■□□□□ 0.24
SMN2-210ENST00000511812 TMEM164Q5U3C3 297 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 BROXQ5VW32 411 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 NXPE1Q8N323 547 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 NCSTNQ92542 709 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 SGF29Q96ES7 293 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 FAM96AQ9H5X1 160 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 POT1Q9NUX5 634 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 SCHIP1Q9P0W5 487 aaPredicted RBP16.57■□□□□ 0.24
SMN2-210ENST00000511812 PKD1L2Q7Z442 2459 aa16.57■□□□□ 0.24
SMN2-210ENST00000511812 HEATR9A2RTY3 570 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 LILRA5A6NI73 299 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 SUN1O94901 812 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 APRTP07741 180 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 THRAP10827 490 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 AMD1P17707 334 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 MPSTP25325 297 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 ITPKBP27987 946 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 CSF2RBP32927 897 aa16.56■□□□□ 0.24
SMN2-210ENST00000511812 SLC19A1P41440 591 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms