RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DBN1Q16643 649 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 HSP90AA5PQ58FG0 334 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 ZNF542PQ5EBM4 170 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 PRAMEF14Q5SWL7 426 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 RELL1Q8IUW5 271 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 UNC5BQ8IZJ1 945 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 GPR150Q8NGU9 434 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 OR1E3Q8WZA6 343 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 CERS2Q96G23 380 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 ELF4Q99607 663 aaPredicted RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 GTPBP2Q9BX10 602 aaKnown RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 GAREM1Q9H706 876 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 RMI1Q9H9A7 625 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 VPS37BQ9H9H4 285 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 FGF22Q9HCT0 170 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 MRPL40Q9NQ50 206 aaKnown RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 IARS2Q9NSE4 1012 aaKnown RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 MARCH4Q9P2E8 410 aaPredicted RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 TENM4Q6N022 2769 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 TMEM131Q92545 1883 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 CABIN1Q9Y6J0 2220 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 H3BM21 787 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 CER1O95813 267 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 TUBBP07437 444 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 IVLP07476 585 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 ZNF8P17098 575 aaPredicted RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 JUNDP17535 347 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 ENGP17813 658 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 OGNP20774 298 aaKnown RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 FRG1Q14331 258 aaKnown RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 SEMA3AQ14563 771 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 KYNUQ16719 465 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 ALG11Q2TAA5 492 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 HLA-BQ31612 363 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 KHDC1Q4VXA5 237 aaKnown RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 LDB1Q86U70 411 aaPredicted RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 GSPT2Q8IYD1 628 aaKnown RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 PHACTR4Q8IZ21 702 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 TCF12Q99081 682 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 FAM167BQ9BTA0 163 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 PARD6BQ9BYG5 372 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 SLC13A1Q9BZW2 595 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 CARS2Q9HA77 564 aaKnown RBP19.78■□□□□ 0.76
CTSD-206ENST00000497544 PLAC1Q9HBJ0 212 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 LRRC4CQ9HCJ2 640 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 ZNHIT2Q9UHR6 403 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 SUFUQ9UMX1 484 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 CELSR3Q9NYQ7 3312 aa19.78■□□□□ 0.76
CTSD-206ENST00000497544 EIF4E1BA6NMX2 242 aaKnown RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 GPR89AB7ZAQ6 455 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 NUAK1O60285 661 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 SPAG6O75602 509 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 CSF2P04141 144 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 FAM153BP0C7A2 387 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 GPR89BP0CG08 455 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 CTSEP14091 401 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 ATP1B2P14415 290 aaPredicted RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 ZNF7P17097 686 aaPredicted RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 NSG1P42857 185 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 ARRB1P49407 418 aaPredicted RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 HK3P52790 923 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 GPX6P59796 221 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 HNRNPKP61978 463 aaKnown RBP eCLIP19.77■□□□□ 0.764e-9■■■■□ 23.4
CTSD-206ENST00000497544 VSNL1P62760 191 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 ZNF423Q2M1K9 1284 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 FAM153CQ494X1 144 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 ZNF470Q6ECI4 717 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 WDR93Q6P2C0 686 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 TRMT10BQ6PF06 316 aaKnown RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 TMEM220Q6QAJ8 160 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 RBFAQ8N0V3 343 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 PNPLA1Q8N8W4 532 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 RASGEF1AQ8N9B8 481 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 PDXPQ96GD0 296 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 SCARF2Q96GP6 870 aaPredicted RBP19.77■□□□□ 0.76
CTSD-206ENST00000497544 MOCS1Q9NZB8 636 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 DGKBQ9Y6T7 804 aa19.77■□□□□ 0.76
CTSD-206ENST00000497544 PIKFYVEQ9Y2I7 2098 aa19.77■□□□□ 0.75
CTSD-206ENST00000497544 GRID2O43424 1007 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 DNAJC6O75061 913 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 FUCA1P04066 466 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 MYBL2P10244 700 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 NME1P15531 152 aaKnown RBP19.76■□□□□ 0.75
CTSD-206ENST00000497544 CSRP1P21291 193 aaKnown RBP19.76■□□□□ 0.75
CTSD-206ENST00000497544 PHBP35232 272 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 GNPDA1P46926 289 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 RXRGP48443 463 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 MGAT5Q09328 741 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 CTBP1Q13363 440 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 PYCR3Q53H96 274 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 CYS1Q717R9 158 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 DET1Q7L5Y6 550 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 GALNT13Q8IUC8 556 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 CILP2Q8IUL8 1156 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 SCG3Q8WXD2 468 aaKnown RBP19.76■□□□□ 0.75
CTSD-206ENST00000497544 SGF29Q96ES7 293 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 BOCQ9BWV1 1114 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 CDC42EP4Q9H3Q1 356 aaKnown RBP19.76■□□□□ 0.75
CTSD-206ENST00000497544 NINJ2Q9NZG7 142 aa19.76■□□□□ 0.75
CTSD-206ENST00000497544 KLF15Q9UIH9 416 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms