RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TRA2AQ13595 282 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDAC4-211ENST00000494800 POU6F1Q14863 301 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 GPR33Q49SQ1 333 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 AGAP9Q5VTM2 703 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 TMEM220Q6QAJ8 160 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 WASH2PQ6VEQ5 465 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 SLITRK4Q8IW52 837 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 RASGEF1AQ8N9B8 481 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 STYXQ8WUJ0 223 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 HNRNPLLQ8WVV9 542 aaKnown RBP17.36■□□□□ 0.37
HDAC4-211ENST00000494800 ETNK1Q9HBU6 452 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 ASCL3Q9NQ33 180 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 WASH6PQ9NQA3 447 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 DRG1Q9Y295 367 aaKnown RBP17.36■□□□□ 0.37
HDAC4-211ENST00000494800 ASXL3Q9C0F0 2248 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 SCN8AQ9UQD0 1980 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 DMXL2Q8TDJ6 3036 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 HGSO14964 777 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 POP7O75817 140 aaKnown RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 MC4RP32245 332 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 CXCR5P32302 372 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 DMPKQ09013 629 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 ZRANB3Q5FWF4 1079 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 FNBP1LQ5T0N5 605 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 NKAIN2Q5VXU1 208 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 ABRAXAS1Q6UWZ7 409 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 JAMLQ86YT9 394 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 RBM12BQ8IXT5 1001 aaKnown RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 CXorf40BQ96DE9 158 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 DNAJC1Q96KC8 554 aaKnown RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 NAP1L3Q99457 506 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 COPS8Q99627 209 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 NUDT22Q9BRQ3 303 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 UCK1Q9HA47 277 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 POT1Q9NUX5 634 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 NLE1Q9NVX2 485 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-211ENST00000494800 PISDQ9UG56 409 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 RP1P56715 2156 aa17.35■□□□□ 0.37
HDAC4-211ENST00000494800 HEATR9A2RTY3 570 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 H7C0S8 307 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 AP3B1O00203 1094 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 SUN1O94901 812 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 APRTP07741 180 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 RPL10P27635 214 aaKnown RBP17.34■□□□□ 0.37
HDAC4-211ENST00000494800 MAPK9P45984 424 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 CTSCP53634 463 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 LIMK2P53671 638 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 XIAPP98170 497 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 CACNA1BQ00975 2339 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 SEMA5AQ13591 1074 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 TMEM164Q5U3C3 297 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 BROXQ5VW32 411 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 TMEM71Q6P5X7 295 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 WDR74Q6RFH5 385 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-211ENST00000494800 C19orf48Q6RUI8 117 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 DET1Q7L5Y6 550 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 C11orf96Q7Z7L8 435 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 ZNF761Q86XN6 746 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-211ENST00000494800 NXPE1Q8N323 547 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 BEND7Q8N7W2 519 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-211ENST00000494800 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 KCNE4Q8WWG9 221 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 PRR11Q96HE9 360 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-211ENST00000494800 PBKQ96KB5 322 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 CCDC74BQ96LY2 380 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 DPH1Q9BZG8 443 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 VPS37BQ9H9H4 285 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 LHX6Q9UPM6 363 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 PCDHGA7Q9Y5G6 932 aa17.34■□□□□ 0.37
HDAC4-211ENST00000494800 IGHV5-10-1A0A0J9YXX1 117 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 A0A1W2PNU3 283 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 LILRA5A6NI73 299 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 AGAP14A8MT82 685 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 CDRT15L2A8MXV6 281 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 KIF5CO60282 957 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 PBLDP30039 288 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 CSTF2P33240 577 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 DRG2P55039 364 aaKnown RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 UBE2IP63279 158 aaKnown RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 CACNG1Q06432 222 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 SIX1Q15475 284 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 COL28A1Q2UY09 1125 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 BCL7AQ4VC05 210 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 NLRP9Q7RTR0 991 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 TAS2R42Q7RTR8 314 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 TMPRSS9Q7Z410 1059 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 CLEC14AQ86T13 490 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 AGBL5Q8NDL9 886 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 NCSTNQ92542 709 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 SGF29Q96ES7 293 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 TTC1Q99614 292 aa17.33■□□□□ 0.36
HDAC4-211ENST00000494800 PIH1D1Q9NWS0 290 aaKnown RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 COL27A1Q8IZC6 1860 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-211ENST00000494800 MGAT4DA6NG13 374 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 PRR19A6NJB7 356 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms