RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 UNC13CQ8NB66 2214 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 PRAMEF33A0A0G2JMD5 474 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 PRAMEF10O60809 474 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 LIPCP11150 499 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 RALBP11234 206 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 XRCC1P18887 633 aaPredicted RBP17.17■□□□□ 0.34
SEC13-218ENST00000490283 MPSTP25325 297 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 VAC14Q08AM6 782 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 CLN3Q13286 438 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 SNAP47Q5SQN1 464 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 AGAP9Q5VTM2 703 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 CCDC81Q6ZN84 652 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 ZNF547Q8IVP9 402 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 RBM12BQ8IXT5 1001 aaKnown RBP17.17■□□□□ 0.34
SEC13-218ENST00000490283 FRMD8P1Q9BZ68 369 aaPredicted RBP17.17■□□□□ 0.34
SEC13-218ENST00000490283 ASB8Q9H765 288 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 POT1Q9NUX5 634 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 CRLS1Q9UJA2 301 aa17.17■□□□□ 0.34
SEC13-218ENST00000490283 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
SEC13-218ENST00000490283 CACNA1GO43497 2377 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 SRP72O76094 671 aaKnown RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 CCDC175P0C221 793 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 AMD1P17707 334 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 ITGALP20701 1170 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 ETV5P41161 510 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 DRG2P55039 364 aaKnown RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 UBE2IP63279 158 aaKnown RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 OLIG2Q13516 323 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 ARHGAP40Q5TG30 622 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 TMEM220Q6QAJ8 160 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 ABRAXAS1Q6UWZ7 409 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 WASH2PQ6VEQ5 465 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 FAM129CQ86XR2 697 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 PLXDC1Q8IUK5 500 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 RASGEF1AQ8N9B8 481 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 SLC35B2Q8TB61 432 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 ULK4Q96C45 1275 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 DCUN1D1Q96GG9 259 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 TAAR9Q96RI9 348 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 CCNL2Q96S94 520 aaPredicted RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 C19orf43Q9BQ61 176 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 TMEM121Q9BTD3 319 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 ARNT2Q9HBZ2 717 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 CPNE5Q9HCH3 593 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 TMEM9Q9P0T7 183 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 FKBPLQ9UIM3 349 aa17.16■□□□□ 0.34
SEC13-218ENST00000490283 R3HDM2Q9Y2K5 976 aaKnown RBP17.16■□□□□ 0.34
SEC13-218ENST00000490283 CELSR3Q9NYQ7 3312 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 OR2AG2A6NM03 316 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 CFAP99D6REC4 459 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 GPR39O43194 453 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 POP7O75817 140 aaKnown RBP17.15■□□□□ 0.34
SEC13-218ENST00000490283 GAS8O95995 478 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 CCL4P13236 92 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 STIP1P31948 543 aaKnown RBP17.15■□□□□ 0.34
SEC13-218ENST00000490283 RAB15P59190 212 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 CFHR1Q03591 330 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 PTPRCAPQ14761 206 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 RPS6KA1Q15418 735 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 FNBP1LQ5T0N5 605 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 TMEM26Q6ZUK4 368 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 TBC1D10AQ9BXI6 508 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 ASPSCR1Q9BZE9 553 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 SLC39A1Q9NY26 324 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 SCHIP1Q9P0W5 487 aaPredicted RBP17.15■□□□□ 0.34
SEC13-218ENST00000490283 KLHL3Q9UH77 587 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 SLC30A1Q9Y6M5 507 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 LAMA5O15230 3695 aa17.15■□□□□ 0.34
SEC13-218ENST00000490283 KIF26BQ2KJY2 2108 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 EFCAB7A8K855 629 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 A8MU76 341 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 STMND1H3BQB6 276 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 GAPDHSO14556 408 aaPredicted RBP17.14■□□□□ 0.33
SEC13-218ENST00000490283 UBXN7O94888 489 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 PBLDP30039 288 aaPredicted RBP17.14■□□□□ 0.33
SEC13-218ENST00000490283 SLC19A1P41440 591 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 LMAN1P49257 510 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 TMPRSS15P98073 1019 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 RHDQ02161 417 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 DMPKQ09013 629 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 SEPT6Q14141 434 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 SOWAHCQ53LP3 525 aaPredicted RBP17.14■□□□□ 0.33
SEC13-218ENST00000490283 DET1Q7L5Y6 550 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 C11orf96Q7Z7L8 435 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 LINC00523Q86TU6 105 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 OR13C4Q8NGS5 318 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 HEXDCQ8WVB3 486 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 ART4Q93070 314 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 DDA1Q9BW61 102 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 LZTFL1Q9NQ48 299 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 FOXJ2Q9P0K8 574 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
SEC13-218ENST00000490283 PDP2Q9P2J9 529 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 ZNF148Q9UQR1 794 aa17.14■□□□□ 0.33
SEC13-218ENST00000490283 KCTD3Q9Y597 815 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms