RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 NVLO15381 856 aaKnown RBP24.58■■□□□ 1.53
HMGN1-217ENST00000489072 DUX1O43812 170 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 PRAMEF10O60809 474 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 XRCC1P18887 633 aaPredicted RBP24.58■■□□□ 1.53
HMGN1-217ENST00000489072 RPL10P27635 214 aaKnown RBP24.58■■□□□ 1.53
HMGN1-217ENST00000489072 SLC19A1P41440 591 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 ZNF140P52738 457 aaPredicted RBP24.58■■□□□ 1.53
HMGN1-217ENST00000489072 CXADRP78310 365 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 XIAPP98170 497 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 TRA2AQ13595 282 aaKnown RBP eCLIP24.58■■□□□ 1.538e-24■■□□□ 11.7
HMGN1-217ENST00000489072 BROXQ5VW32 411 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 CCDC112Q8NEF3 446 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 TBC1D10AQ9BXI6 508 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 ZCCHC2Q9C0B9 1178 aaKnown RBP24.58■■□□□ 1.53
HMGN1-217ENST00000489072 FOXJ2Q9P0K8 574 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 PDP2Q9P2J9 529 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 ATMQ13315 3056 aa24.58■■□□□ 1.53
HMGN1-217ENST00000489072 PDZK1P1A8MUH7 402 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 C9orf172C9J069 976 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 PPM1FP49593 454 aaPredicted RBP24.57■■□□□ 1.52
HMGN1-217ENST00000489072 EPHA4P54764 986 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 DRG2P55039 364 aaKnown RBP24.57■■□□□ 1.52
HMGN1-217ENST00000489072 SEL1L2Q5TEA6 688 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 TMEM220Q6QAJ8 160 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 ABRAXAS1Q6UWZ7 409 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 TAB3Q8N5C8 712 aaPredicted RBP24.57■■□□□ 1.52
HMGN1-217ENST00000489072 ZMYND15Q9H091 742 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 AKAP7Q9P0M2 348 aaPredicted RBP24.57■■□□□ 1.52
HMGN1-217ENST00000489072 SDK2Q58EX2 2172 aa24.57■■□□□ 1.52
HMGN1-217ENST00000489072 ATRXP46100 2492 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 LILRA5A6NI73 299 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 OR2AG2A6NM03 316 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 LDB2O43679 373 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 SRP72O76094 671 aaKnown RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 CRTAMO95727 393 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 FGF3P11487 239 aaPredicted RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 IDSP22304 550 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 MAPK9P45984 424 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 TMPRSS3P57727 454 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 TMPRSS15P98073 1019 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 MEI1Q5TIA1 1274 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 AGAP9Q5VTM2 703 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 WDR74Q6RFH5 385 aaPredicted RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 WASH2PQ6VEQ5 465 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 MICALCLQ6ZW33 695 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 SLC13A5Q86YT5 568 aaPredicted RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 LRRC8AQ8IWT6 810 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 AVL9Q8NBF6 648 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 NAT14Q8WUY8 206 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 NCSTNQ92542 709 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 PMEPA1Q969W9 287 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 RTP4Q96DX8 246 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 ASB8Q9H765 288 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 WASH6PQ9NQA3 447 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 FEZ2Q9UHY8 353 aaPredicted RBP24.56■■□□□ 1.52
HMGN1-217ENST00000489072 WDR37Q9Y2I8 494 aa24.56■■□□□ 1.52
HMGN1-217ENST00000489072 OR52A4PA6NMU1 304 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 CCL22O00626 93 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 LIASO43766 372 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 POP7O75817 140 aaKnown RBP24.55■■□□□ 1.52
HMGN1-217ENST00000489072 UCNP55089 124 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 TGIF1Q15583 401 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 OASLQ15646 514 aaKnown RBP24.55■■□□□ 1.52
HMGN1-217ENST00000489072 FAM83HQ6ZRV2 1179 aaPredicted RBP24.55■■□□□ 1.52
HMGN1-217ENST00000489072 TMEM26Q6ZUK4 368 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 GPR155Q7Z3F1 870 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 AMZ2Q86W34 360 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 AGBL5Q8NDL9 886 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 LRRC40Q9H9A6 602 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 UCK1Q9HA47 277 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 LZTFL1Q9NQ48 299 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 OGFRQ9NZT2 677 aa24.55■■□□□ 1.52
HMGN1-217ENST00000489072 AGAP14A8MT82 685 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 KALRNO60229 2985 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 VIPP01282 170 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 TPH1P17752 444 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 VCLP18206 1134 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 MSH3P20585 1137 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 AKT1P31749 480 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 CCZ1BP86790 482 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 CCZ1P86791 482 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-217ENST00000489072 PDE1BQ01064 536 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 DMPKQ09013 629 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 CLCA4Q14CN2 919 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 RPS6KA1Q15418 735 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 P3H1Q32P28 736 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 SNAP47Q5SQN1 464 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 ZNF662Q6ZS27 426 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 DET1Q7L5Y6 550 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 ARHGAP22Q7Z5H3 698 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 ZFAND4Q86XD8 727 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 TRIM48Q8IWZ4 208 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 BEND7Q8N7W2 519 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-217ENST00000489072 UBE2Q2Q8WVN8 375 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 C1orf54Q8WWF1 131 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 SGF29Q96ES7 293 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 PIH1D1Q9NWS0 290 aaKnown RBP24.54■■□□□ 1.52
HMGN1-217ENST00000489072 OCIAD1Q9NX40 245 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms