RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 OR5K4A6NMS3 321 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 METTL18O95568 372 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 CRTAMO95727 393 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 CCL4P13236 92 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 RPL10P27635 214 aaKnown RBP17.46■□□□□ 0.39
ITGB1-215ENST00000488494 CTSCP53634 463 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 EPHA4P54764 986 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 DRG2P55039 364 aaKnown RBP17.46■□□□□ 0.39
ITGB1-215ENST00000488494 UCNP55089 124 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 SQSTM1Q13501 440 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 TRA2AQ13595 282 aaKnown RBP eCLIP17.46■□□□□ 0.39
ITGB1-215ENST00000488494 PARP6Q2NL67 630 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 P3H1Q32P28 736 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 OR13C4Q8NGS5 318 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 BRSK1Q8TDC3 778 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 TBC1D10AQ9BXI6 508 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
ITGB1-215ENST00000488494 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
ITGB1-215ENST00000488494 KALRNO60229 2985 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 LILRA5A6NI73 299 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 OR2AG2A6NM03 316 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 CCL22O00626 93 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 NVLO15381 856 aaKnown RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 LIASO43766 372 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 SRP72O76094 671 aaKnown RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 CCDC175P0C221 793 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 BRAFP15056 766 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 PBLDP30039 288 aaPredicted RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 SNAP47Q5SQN1 464 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 KCTD11Q693B1 232 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 TMEM71Q6P5X7 295 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 DET1Q7L5Y6 550 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 AGBL5Q8NDL9 886 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 ZNF398Q8TD17 642 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 USP7Q93009 1102 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 LRRC40Q9H9A6 602 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 ARNT2Q9HBZ2 717 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 FEZ2Q9UHY8 353 aaPredicted RBP17.45■□□□□ 0.38
ITGB1-215ENST00000488494 ACSL6Q9UKU0 697 aa17.45■□□□□ 0.38
ITGB1-215ENST00000488494 ATMQ13315 3056 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 OR52A4PA6NMU1 304 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 C9orf172C9J069 976 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 VIPP01282 170 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 MSH3P20585 1137 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 IDSP22304 550 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 PDE1BQ01064 536 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 SEPT6Q14141 434 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 FNBP1LQ5T0N5 605 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 MEI1Q5TIA1 1274 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 AGAP9Q5VTM2 703 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 WDR74Q6RFH5 385 aaPredicted RBP17.44■□□□□ 0.38
ITGB1-215ENST00000488494 GPR155Q7Z3F1 870 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 AMZ2Q86W34 360 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 FAM129CQ86XR2 697 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 SLC13A5Q86YT5 568 aaPredicted RBP17.44■□□□□ 0.38
ITGB1-215ENST00000488494 NAT14Q8WUY8 206 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 NCSTNQ92542 709 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 PMEPA1Q969W9 287 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 RTP4Q96DX8 246 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 ASB8Q9H765 288 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 POT1Q9NUX5 634 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 PIH1D1Q9NWS0 290 aaKnown RBP17.44■□□□□ 0.38
ITGB1-215ENST00000488494 ZNF624Q9P2J8 865 aaPredicted RBP17.44■□□□□ 0.38
ITGB1-215ENST00000488494 CRLS1Q9UJA2 301 aa17.44■□□□□ 0.38
ITGB1-215ENST00000488494 A8MU76 341 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 AP2A1O95782 977 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 XRCC1P18887 633 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 CSTF2P33240 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 SLC19A1P41440 591 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 CCZ1BP86790 482 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 CCZ1P86791 482 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 XIAPP98170 497 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 RPS6KA1Q15418 735 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 OASLQ15646 514 aaKnown RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 LONRF2Q1L5Z9 754 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 SOWAHCQ53LP3 525 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 ARHGAP40Q5TG30 622 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 TMEM220Q6QAJ8 160 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 ABRAXAS1Q6UWZ7 409 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 WASH2PQ6VEQ5 465 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 FAM83HQ6ZRV2 1179 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 TMEM26Q6ZUK4 368 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 BEND7Q8N7W2 519 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 C1orf54Q8WWF1 131 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 CXorf40BQ96DE9 158 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 DNAJC1Q96KC8 554 aaKnown RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 UBL7Q96S82 380 aaPredicted RBP17.43■□□□□ 0.38
ITGB1-215ENST00000488494 EPB41L1Q9H4G0 881 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 UCK1Q9HA47 277 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 WASH6PQ9NQA3 447 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 KLHL3Q9UH77 587 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 WDR37Q9Y2I8 494 aa17.43■□□□□ 0.38
ITGB1-215ENST00000488494 LDB2O43679 373 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 POP7O75817 140 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms