RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 LTB4R2Q9NPC1 389 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 PCDHB16Q9NRJ7 776 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 C1RLQ9NZP8 487 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 ORC3Q9UBD5 711 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-214ENST00000488427 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 MKLN1Q9UL63 735 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 BAHCC1Q9P281 2608 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 E9PCH4 1651 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 C5P01031 1676 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 USP6P35125 1406 aa4.28□□□□□ -1.72
ITGB1-214ENST00000488427 NCOR1O75376 2440 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ITIH6Q6UXX5 1313 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 A0A087X0M5 115 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 A0A1B0GX30 115 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 A0A1W2PS18 150 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 VCYO14598 125 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 HCRTR2O43614 444 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 BUD23O43709 281 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 EGFP01133 1207 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 EIF2S1P05198 315 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 PDLIM4P50479 330 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 F2RL1P55085 397 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 GRSF1Q12849 480 aaKnown RBP eCLIP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 PDE1CQ14123 709 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 CRYMQ14894 314 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ZRSR1Q15695 479 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ALG11Q2TAA5 492 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 TMEM35AQ53FP2 167 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 C9orf50Q5SZB4 431 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 DUS1LQ6P1R4 473 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 NCEH1Q6PIU2 408 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ZNF704Q6ZNC4 412 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 HAPLN4Q86UW8 402 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 KMT5CQ86Y97 462 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 TICAM1Q8IUC6 712 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 LMNTD1Q8N9Z9 388 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 TAAR8Q969N4 342 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ORAI1Q96D31 301 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 MMABQ96EY8 250 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 CSF3RQ99062 836 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 MTERF1Q99551 399 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 SEPT5Q99719 369 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 GLIS2Q9BZE0 524 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 RANGRFQ9HD47 186 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 KRT84Q9NSB2 600 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ACSS1Q9NUB1 689 aaPredicted RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 FBXW11Q9UKB1 542 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 ACSL5Q9ULC5 683 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 LYVE1Q9Y5Y7 322 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 SCN4AP35499 1836 aa4.27□□□□□ -1.73
ITGB1-214ENST00000488427 RBBP6Q7Z6E9 1792 aaKnown RBP4.27□□□□□ -1.73
ITGB1-214ENST00000488427 PASKQ96RG2 1323 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 KIF1BO60333 1816 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 GLTPD2A6NH11 291 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 LILRA5A6NI73 299 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 SNAP23O00161 211 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MID1O15344 667 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 GPC4O75487 556 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 RNASEH2AO75792 299 aaKnown RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 TBX18O95935 607 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 FTCDO95954 541 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 CETPP11597 493 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ZNF23P17027 643 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MT3P25713 68 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ARF3P61204 181 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ARF1P84077 181 aaKnown RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 PNLIPRP3Q17RR3 467 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ZSCAN23Q3MJ62 389 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ZNF718Q3SXZ3 478 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 GDPD4Q6W3E5 623 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MAATS1Q7Z4T9 603 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 NR2C2APQ86WQ0 139 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 CHERPQ8IWX8 916 aaKnown RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 CCDC13Q8IYE1 715 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 LNX1Q8TBB1 728 aaPredicted RBP4.26□□□□□ -1.73
ITGB1-214ENST00000488427 CD101Q93033 1021 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 NUDCD1Q96RS6 583 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 NEURL2Q9BR09 285 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 TMEM39BQ9GZU3 492 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MUC13Q9H3R2 512 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MAGIXQ9H6Y5 334 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 PLEKHA5Q9HAU0 1116 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 MMP25Q9NPA2 562 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 AASSQ9UDR5 926 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 STK39Q9UEW8 545 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 OR14J1Q9UGF5 321 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 TINAGQ9UJW2 476 aa4.26□□□□□ -1.73
ITGB1-214ENST00000488427 FBXL2Q9UKC9 423 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms