RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 UBE2Q2Q8WVN8 375 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 USP7Q93009 1102 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 TBL1YQ9BQ87 522 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ARNT2Q9HBZ2 717 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 SMOXQ9NWM0 555 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 ZNF624Q9P2J8 865 aaPredicted RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 PDP2Q9P2J9 529 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 FEZ2Q9UHY8 353 aaPredicted RBP11.27□□□□□ -0.61
SPEN-205ENST00000487496 ACSL6Q9UKU0 697 aa11.27□□□□□ -0.61
SPEN-205ENST00000487496 LILRA5A6NI73 299 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 PDZK1P1A8MUH7 402 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 C9orf172C9J069 976 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 KCNJ13O60928 360 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 POP7O75817 140 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 SRP72O76094 671 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 CRTAMO95727 393 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 VIPP01282 170 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 VCLP18206 1134 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 RPL10P27635 214 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 CSTF2P33240 577 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPEN-205ENST00000487496 SLC19A1P41440 591 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 PPM1FP49593 454 aaPredicted RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 XIAPP98170 497 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 PDE1BQ01064 536 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 P3H1Q32P28 736 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 AGAP9Q5VTM2 703 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 TMEM220Q6QAJ8 160 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 WDR74Q6RFH5 385 aaPredicted RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 WASH2PQ6VEQ5 465 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 AMZ2Q86W34 360 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 AGBL5Q8NDL9 886 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 OR13C4Q8NGS5 318 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 NCSTNQ92542 709 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 ZCCHC2Q9C0B9 1178 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 B3GNT4Q9C0J1 378 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 EPB41L1Q9H4G0 881 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 ASB8Q9H765 288 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 CPNE5Q9HCH3 593 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 WASH6PQ9NQA3 447 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 FOXJ2Q9P0K8 574 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
SPEN-205ENST00000487496 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
SPEN-205ENST00000487496 TEX51A0A1B0GUA7 166 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 OR2AG2A6NM03 316 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 LDB2O43679 373 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 CCDC175P0C221 793 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 MSH3P20585 1137 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 AKT1P31749 480 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 MAPK9P45984 424 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 ZNF140P52738 457 aaPredicted RBP11.25□□□□□ -0.61
SPEN-205ENST00000487496 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 DMPKQ09013 629 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 CLCA4Q14CN2 919 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 RPS6KA1Q15418 735 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 TGIF1Q15583 401 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 LONRF2Q1L5Z9 754 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 SNAP47Q5SQN1 464 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 SEL1L2Q5TEA6 688 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 ARHGAP40Q5TG30 622 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 MEI1Q5TIA1 1274 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 TMEM26Q6ZUK4 368 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 SLC13A5Q86YT5 568 aaPredicted RBP11.25□□□□□ -0.61
SPEN-205ENST00000487496 LRRC8AQ8IWT6 810 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 TRIM48Q8IWZ4 208 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 TAB3Q8N5C8 712 aaPredicted RBP11.25□□□□□ -0.61
SPEN-205ENST00000487496 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 SGF29Q96ES7 293 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 UBL7Q96S82 380 aaPredicted RBP11.25□□□□□ -0.61
SPEN-205ENST00000487496 C19orf43Q9BQ61 176 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 LRRC40Q9H9A6 602 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 WDR37Q9Y2I8 494 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 PCDHGA3Q9Y5H0 932 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 AHCTF1Q8WYP5 2266 aa11.25□□□□□ -0.61
SPEN-205ENST00000487496 OR52A4PA6NMU1 304 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 A8MU76 341 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 PSMD3O43242 534 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 LIASO43766 372 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 AP2A1O95782 977 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 LIPCP11150 499 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 TPH1P17752 444 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 CD82P27701 267 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 STIP1P31948 543 aaKnown RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 HADHAP40939 763 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 ARSDP51689 593 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 NFE2L1Q14494 772 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms