RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 AFG3L2Q9Y4W6 797 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CDY1Q9Y6F8 540 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RBBP6Q7Z6E9 1792 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 THSD7AQ9UPZ6 1657 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 BCLAF3A2AJT9 711 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TRIM43BA6NCK2 446 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CLCA1A8K7I4 914 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TMEM114B3SHH9 223 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 H3BNX3 289 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 K7ERI5 159 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TRIM38O00635 465 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 HOXC11O43248 304 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 SNNO75324 88 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ENTPD5O75356 428 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TOM1L1O75674 476 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ENDOD1O94919 500 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CBX6O95503 412 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 IGLV2-14P01704 120 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TNNC2P02585 160 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 LYNP07948 512 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FTH1P19P0C7X4 201 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CETPP11597 493 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 KRT3P12035 628 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 UQCRBP14927 111 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ALOX15P16050 662 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CREB1P16220 341 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ITGB6P18564 788 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 MALP21145 153 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 KDELR1P24390 212 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ADRA1DP25100 572 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 PSMA2P25787 234 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ICAM3P32942 547 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FDFT1P37268 417 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 PEX19P40855 299 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 RPL5P46777 297 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 GABRB2P47870 512 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 POLD2P49005 469 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 SERPINB8P50452 374 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF135P52742 658 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 COPAP53621 1224 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CLRN1P58418 232 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TAS2R40P59535 323 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 GPX6P59796 221 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 EIF3EP60228 445 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 STX3Q13277 289 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 SNAPC2Q13487 334 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TNFAIP1Q13829 316 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TFDP1Q14186 410 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 DPYSL3Q14195 570 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 MXD4Q14582 209 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF169Q14929 603 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 HERC3Q15034 1050 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CCDC153Q494R4 210 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 LIN52Q52LA3 116 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ACSBG2Q5FVE4 666 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 C3orf38Q5JPI3 329 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 RARS2Q5T160 578 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TEDDM1Q5T9Z0 273 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAXCQ5TGI0 409 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ARHGEF16Q5VV41 709 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 C1orf146Q5VVC0 180 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAM160B1Q5W0V3 765 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 KLC3Q6P597 504 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TMEM270Q6UE05 265 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 C16orf89Q6UX73 402 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 MFSD7Q6UXD7 560 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CATSPERGQ6ZRH7 1159 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 MARK2Q7KZI7 788 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ARHGAP22Q7Z5H3 698 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 RHPN2Q8IUC4 686 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 EGFL6Q8IUX8 553 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 NUDCD3Q8IVD9 361 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ZBTB8OSQ8IWT0 167 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 C4orf33Q8N1A6 199 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 LRRC43Q8N309 656 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TERB1Q8NA31 727 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 KCTD6Q8NC69 237 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 GSDMBQ8TAX9 411 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAM81AQ8TBF8 368 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 RDH11Q8TC12 318 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 IFI44Q8TCB0 444 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 STT3BQ8TCJ2 826 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 SPPL3Q8TCT6 385 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 BRIX1Q8TDN6 353 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAM172AQ8WUF8 416 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CPT1BQ92523 772 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TOP1MTQ969P6 601 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 AZIN2Q96A70 460 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 DGCR14Q96DF8 476 aaKnown RBP4.81□□□□□ -1.64
SSBP1-211ENST00000484178 PPP1R2P1Q96PQ5 205 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 TSPAN18Q96SJ8 248 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 SYT15Q9BQS2 421 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 FAM213AQ9BRX8 229 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 CNPY3Q9BT09 278 aa4.81□□□□□ -1.64
SSBP1-211ENST00000484178 HAUS8Q9BT25 410 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms