RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CILPO75339 1184 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SCGNO76038 276 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ACLYP53396 1101 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ABATP80404 500 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 HID1Q8IV36 788 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PIK3C3Q8NEB9 887 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 KBTBD8Q8NFY9 601 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SLC44A1Q8WWI5 657 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PSMG2Q969U7 264 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PLGRKTQ9HBL7 147 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TBC1D14Q9P2M4 693 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 URB1O60287 2271 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 AP2A2O94973 939 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 KIR3DL1P43629 444 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 MSANTD2Q6P1R3 559 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PRSS55Q6UWB4 352 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 KLHL32Q96NJ5 620 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 AGAP2Q99490 1192 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PNPLA3Q9NST1 481 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TMLHEQ9NVH6 421 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 GTF2IRD1Q9UHL9 959 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 STK16O75716 305 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PRKAR1AP10644 381 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 IL12AP29459 219 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 SLC26A9Q7LBE3 791 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SIDT2Q8NBJ9 832 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 TSEN15Q8WW01 171 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 NUDT17P0C025 328 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ACRP10323 421 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 PDHA2P29803 388 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 MC1RQ01726 317 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 CACNG1Q06432 222 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TMEM63BQ5T3F8 832 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TMEM220Q6QAJ8 160 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 BEND5Q7L4P6 421 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 GTPBP3Q969Y2 492 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 HOPXQ9BPY8 73 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 BAZ2AQ9UIF9 1905 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 PRKCGP05129 697 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ANXA4P09525 319 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 LAG3P18627 525 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 IDSP22304 550 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 IGFBP5P24593 272 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TGFBR2P37173 567 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 MNDAP41218 407 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 GNA12Q03113 381 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 MYBPC3Q14896 1274 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 LARS2Q15031 903 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 FBXO42Q6P3S6 717 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 RNF19BQ6ZMZ0 732 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 FBXO15Q8NCQ5 510 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 HEXDCQ8WVB3 486 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ESAMQ96AP7 390 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 GAL3ST1Q99999 423 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 CDKN2BP42772 138 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 AIF1P55008 147 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ARL13AQ5H913 290 aaPredicted RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 SERPINA9Q86WD7 417 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ATCAYQ86WG3 371 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ZNF567Q8N184 647 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 LRRC17Q8N6Y2 441 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TIFAQ96CG3 184 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 SLC38A3Q99624 504 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 TDRD1Q9BXT4 1180 aaKnown RBP10.87□□□□□ -0.67
VAPB-204ENST00000475243 NMUR2Q9GZQ4 415 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 ELOVL2Q9NXB9 296 aa10.87□□□□□ -0.67
VAPB-204ENST00000475243 INSIG1O15503 277 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PRKCHP24723 683 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
VAPB-204ENST00000475243 ZNF846Q147U1 533 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 DENND5AQ6IQ26 1287 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TATDN1Q6P1N9 297 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 MON1BQ7L1V2 547 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 MCEMP1Q8IX19 187 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 LIX1Q8N485 282 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 HTRA1Q92743 480 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 RNF31Q96EP0 1072 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 C1QTNF1Q9BXJ1 281 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 PHF24Q9UPV7 400 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 ARL5AQ9Y689 179 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 ARHGAP23Q9P227 1491 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 SDK1Q7Z5N4 2213 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 LRRC72A6NJI9 287 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NFATC1O95644 943 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 FOXM1Q08050 763 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 KLF10Q13118 480 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 LDLRAP1Q5SW96 308 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 VITQ6UXI7 678 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 NAPRTQ6XQN6 538 aa10.86□□□□□ -0.67
VAPB-204ENST00000475243 TBC1D21Q8IYX1 336 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms