RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 NEU2Q9Y3R4 380 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 SLC30A1Q9Y6M5 507 aa18.63■□□□□ 0.57
PTCD3-210ENST00000473829 KMT2BQ9UMN6 2715 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 HEATR9A2RTY3 570 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 PHF2O75151 1096 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 POP7O75817 140 aaKnown RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 KRT14P02533 472 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 MPOP05164 745 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 RPL10P27635 214 aaKnown RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 PBLDP30039 288 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 UBE2IP63279 158 aaKnown RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 CRADDP78560 199 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 HHEXQ03014 270 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 GPS1Q13098 491 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 AMZ1Q400G9 498 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 TSTD2Q5T7W7 516 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 CCDC137Q6PK04 289 aaKnown RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 PROSER1Q86XN7 944 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 ULK4Q96C45 1275 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 RDH14Q9HBH5 336 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 SARS2Q9NP81 518 aaKnown RBP18.62■□□□□ 0.57
PTCD3-210ENST00000473829 DKK4Q9UBT3 224 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 TCAF1Q9Y4C2 921 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 APC2O95996 2303 aa18.62■□□□□ 0.57
PTCD3-210ENST00000473829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 IGLV3-16A0A075B6K0 115 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 KIR2DS5A0A0G2JLQ3 304 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 A0A0G2JNG1 304 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 CCDC162PA2VCL2 907 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 PDZK1P1A8MUH7 402 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 KIR2DS3K7RE56 304 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 GAS8O95995 478 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 TCP1P17987 556 aaKnown RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 TPSB2P20231 275 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 ADRA1DP25100 572 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 ACRV1P26436 265 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 CD1CP29017 333 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 FOXN2P32314 431 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 CSF2RBP32927 897 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 GPR3P46089 330 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 SESN2P58004 480 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 DMPKQ09013 629 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 BIRC2Q13490 618 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 NFE2L1Q14494 772 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 KCNJ11Q14654 390 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 KIR2DS5Q14953 304 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 TPSAB1Q15661 275 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 GPR33Q49SQ1 333 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 BCL7AQ4VC05 210 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 NKAIN2Q5VXU1 208 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 ANKRD22Q5VYY1 191 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 PAPD7Q5XG87 772 aaKnown RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 SERPINA9Q86WD7 417 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 COPS8Q99627 209 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 NUDT22Q9BRQ3 303 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 ZNF624Q9P2J8 865 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-210ENST00000473829 SATB2Q9UPW6 733 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 WDR37Q9Y2I8 494 aa18.61■□□□□ 0.57
PTCD3-210ENST00000473829 LAMA5O15230 3695 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 IGHV1OR21-1A0A087WYE8 117 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 PRAMEF33A0A0G2JMD5 474 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 BRINP1O60477 761 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 TMEM63AO94886 807 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 MAGEA6P43360 314 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 GABREP78334 506 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 CFHR1Q03591 330 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 ACVR1Q04771 509 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 CACNG1Q06432 222 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 DBN1Q16643 649 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 SKIDA1Q1XH10 827 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 MAP9Q49MG5 647 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 C3orf38Q5JPI3 329 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 ABRAXAS1Q6UWZ7 409 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 USP53Q70EK8 1073 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 TAS2R42Q7RTR8 314 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 AMZ2Q86W34 360 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 SLITRK4Q8IW52 837 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 HDAC10Q969S8 669 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 CAPZA3Q96KX2 299 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 NAPGQ99747 312 aaPredicted RBP18.6■□□□□ 0.57
PTCD3-210ENST00000473829 EPB41L5Q9HCM4 733 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 ZDHHC3Q9NYG2 299 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 CPNE7Q9UBL6 633 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 AK5Q9Y6K8 562 aa18.6■□□□□ 0.57
PTCD3-210ENST00000473829 PIKFYVEQ9Y2I7 2098 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 OR52A4PA6NMU1 304 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 GOT2P00505 430 aaKnown RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 SLC2A4P14672 509 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 VCLP18206 1134 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 IDSP22304 550 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 SLC19A1P41440 591 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 FNTAP49354 379 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 PRLHRP49683 370 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 INHBCP55103 352 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 ZFP36L1Q07352 338 aaKnown RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 CLCA4Q14CN2 919 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 AGAP9Q5VTM2 703 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 WASH2PQ6VEQ5 465 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms