RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GSRP00390 522 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 FYNP06241 537 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ANXA6P08133 673 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CTSEP14091 401 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PRLRP16471 622 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 XPAP23025 273 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 CCKBRP32239 447 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 HTR7P34969 479 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 MSX2P35548 267 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 USP8P40818 1118 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CCNHP51946 323 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 AIF1P55008 147 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PPARDQ03181 441 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 DEUP1Q05D60 604 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CD69Q07108 199 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 NME3Q13232 169 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PNOCQ13519 176 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 EIF4EBP2Q13542 120 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 RIN1Q13671 783 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PDE1CQ14123 709 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 BECN1Q14457 450 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CDKN3Q16667 212 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 EXOC3L4Q17RC7 722 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ZNF284Q2VY69 593 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SLC25A52Q3SY17 297 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 POM121L1PQ3SYA9 428 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ZNF805Q5CZA5 627 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CRB2Q5IJ48 1285 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PRAMEF14Q5SWL7 426 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ARHGAP40Q5TG30 622 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ANKRD40Q6AI12 368 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PPP1R2P3Q6NXS1 205 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ERAP2Q6P179 960 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TRIM65Q6PJ69 517 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 OLFML1Q6UWY5 402 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 GBP6Q6ZN66 633 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 GCNT7Q6ZNI0 430 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 MMS22LQ6ZRQ5 1243 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 Q6ZSR6 202 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 RRAGAQ7L523 313 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ARCQ7LC44 396 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 EFL1Q7Z2Z2 1120 aaKnown RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 ZNF677Q86XU0 584 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 APCDD1Q8J025 514 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SLC22A18ASQ8N1D0 253 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SLC25A45Q8N413 288 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TMEM35BQ8NCS4 154 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 OR2A12Q8NGT7 310 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SPATA20Q8TB22 786 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 KIAA1524Q8TCG1 905 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 HCAR2Q8TDS4 363 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CXorf40AQ8TE69 158 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CLEC4CQ8WTT0 213 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ZNF606Q8WXB4 792 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TFAP2BQ92481 460 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 NDRG1Q92597 394 aaKnown RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 SGF29Q96ES7 293 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 GDAP1L1Q96MZ0 367 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 GFM1Q96RP9 751 aaKnown RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 HAPLN3Q96S86 360 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SEMA3CQ99985 751 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 CCDC3Q9BQI4 270 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 HEPHQ9BQS7 1158 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 MENTQ9BUN1 341 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 EFHD1Q9BUP0 239 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TKTL2Q9H0I9 626 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SLC6A15Q9H2J7 730 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ADNPQ9H2P0 1102 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SYNDIG1Q9H7V2 258 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 EBF2Q9HAK2 575 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 MSL2Q9HCI7 577 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ASCL3Q9NQ33 180 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 HAUS2Q9NVX0 235 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ARHGEF38Q9NXL2 777 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.53□□□□□ -1.84
XRN1-209ENST00000472625 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SAE1Q9UBE0 346 aaPredicted RBP3.53□□□□□ -1.84
XRN1-209ENST00000472625 VPS51Q9UID3 782 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 TUBD1Q9UJT1 453 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 SATB2Q9UPW6 733 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 ZKSCAN5Q9Y2L8 839 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 PCDHB1Q9Y5F3 818 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 HS3ST4Q9Y661 456 aa3.53□□□□□ -1.84
XRN1-209ENST00000472625 MGAQ8IWI9 3026 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 SPTA1P02549 2419 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 MYO18AQ92614 2054 aaKnown RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 A0A1W2PR48 441 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 CPED1A4D0V7 1026 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 CFAP69A5D8W1 941 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 TRIM49BA6NDI0 452 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 EIF3CLB5ME19 914 aaKnown RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 STMND1H3BQB6 276 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 CACNB4O00305 520 aaPredicted RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 NVLO15381 856 aaKnown RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 NUDT21O43809 227 aaKnown RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 TM7SF2O76062 418 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 TOX4O94842 621 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 TNFSF15O95150 251 aa3.52□□□□□ -1.85
XRN1-209ENST00000472625 POP4O95707 220 aaKnown RBP3.52□□□□□ -1.85
XRN1-209ENST00000472625 PRB1P04280 392 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms