RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PRKAR1AP10644 381 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 CHRNA4P43681 627 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 CCR10P46092 362 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 GEMP55040 296 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 UBE2IP63279 158 aaKnown RBP17.23■□□□□ 0.35
COL7A1-206ENST00000466591 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 SLC1A5Q15758 541 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 LONRF2Q1L5Z9 754 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 LINC00303Q3SY05 128 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 C11orf63Q6NUN7 778 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 CDKL3Q8IVW4 592 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-206ENST00000466591 EXD3Q8N9H8 876 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 TADA1Q96BN2 335 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 STAMBPL1Q96FJ0 436 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 C9orf72Q96LT7 481 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 CATSPER2Q96P56 530 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 FCRL5Q96RD9 977 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 FICDQ9BVA6 458 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 ULBP3Q9BZM4 244 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 SCHIP1Q9P0W5 487 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-206ENST00000466591 FAM8A1Q9UBU6 413 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 SLC23A2Q9UGH3 650 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 ADGRG1Q9Y653 693 aa17.23■□□□□ 0.35
COL7A1-206ENST00000466591 LOC285095A0A1B0GVY8 99 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 KCNJ13O60928 360 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 WT1P19544 449 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-206ENST00000466591 CD68P34810 354 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-206ENST00000466591 SLC19A1P41440 591 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 HADHBP55084 474 aaKnown RBP17.22■□□□□ 0.35
COL7A1-206ENST00000466591 GFERP55789 205 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 MC1RQ01726 317 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 XRCC4Q13426 336 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 KRT33BQ14525 404 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 CHRNA6Q15825 494 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 CACHD1Q5VU97 1274 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 KDELC1Q6UW63 502 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 FAM92BQ6ZTR7 304 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 ESX1Q8N693 406 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 BMPERQ8N8U9 685 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 DCUN1D1Q96GG9 259 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 ELMO2Q96JJ3 720 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 MRGPRX2Q96LB1 330 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 OR6C1Q96RD1 312 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 APMAPQ9HDC9 416 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 IL26Q9NPH9 171 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 ZNF624Q9P2J8 865 aaPredicted RBP17.22■□□□□ 0.35
COL7A1-206ENST00000466591 PILRAQ9UKJ1 303 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 PSMD13Q9UNM6 376 aa17.22■□□□□ 0.35
COL7A1-206ENST00000466591 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 OR2AG2A6NM03 316 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 PYCARD-AS1I3L0S3 204 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 APOC4-APOC2K7ER74 178 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 POP7O75817 140 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 APOC2P02655 101 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 ANKRD34CP0C6C1 535 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 RALBP11234 206 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 CAPZBP47756 277 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 MARCKSL1P49006 195 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 ARSDP51689 593 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 KCNC4Q03721 635 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 SEPT6Q14141 434 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 GPR18Q14330 331 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TAZQ16635 292 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 ARMC6Q6NXE6 501 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 C16orf46Q6P387 395 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 DARS2Q6PI48 645 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TMEM220Q6QAJ8 160 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 SARM1Q6SZW1 724 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 ABRAXAS1Q6UWZ7 409 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 ATG14Q6ZNE5 492 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 DET1Q7L5Y6 550 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TTC30BQ8N4P2 665 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TC2NQ8N9U0 490 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 OXNAD1Q96HP4 312 aaPredicted RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 GBA3Q9H227 469 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 IMP3Q9NV31 184 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 LNPEPQ9UIQ6 1025 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 TFR2Q9UP52 801 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 AAR2Q9Y312 384 aaKnown RBP17.21■□□□□ 0.35
COL7A1-206ENST00000466591 PCDHB3Q9Y5E6 796 aa17.21■□□□□ 0.35
COL7A1-206ENST00000466591 MGAQ8IWI9 3026 aa17.21■□□□□ 0.34
COL7A1-206ENST00000466591 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A9O60656 530 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 PRAMEF1O95521 474 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 CCNYL3P0C7X3 344 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A6P19224 532 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 TCN2P20062 427 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A1P22309 533 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 UGT1A4P22310 534 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 RBL1P28749 1068 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 POLE2P56282 527 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 EIF3EP60228 445 aaKnown RBP17.2■□□□□ 0.34
COL7A1-206ENST00000466591 COPS2P61201 443 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 ABHD18Q0P651 414 aa17.2■□□□□ 0.34
COL7A1-206ENST00000466591 GSE1Q14687 1217 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms