RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 AP2A1O95782 977 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 TPH1P17752 444 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 IDSP22304 550 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 POU6F1Q14863 301 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 LONRF2Q1L5Z9 754 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 SNAP47Q5SQN1 464 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 FNBP1LQ5T0N5 605 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 BROXQ5VW32 411 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 KCTD11Q693B1 232 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF574Q6ZN55 896 aaPredicted RBP20.72■□□□□ 0.91
CDKN3-204ENST00000442975 KLHDC8BQ8IXV7 354 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 OR4D9Q8NGE8 314 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 NAT14Q8WUY8 206 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 DNAJC1Q96KC8 554 aaKnown RBP20.72■□□□□ 0.91
CDKN3-204ENST00000442975 TBC1D10AQ9BXI6 508 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 FAM8A1Q9UBU6 413 aa20.72■□□□□ 0.91
CDKN3-204ENST00000442975 OR52A4PA6NMU1 304 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 VIPP01282 170 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 ITGALP20701 1170 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 SLC5A2P31639 672 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 ETV5P41161 510 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 LMAN1P49257 510 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 LIMK2P53671 638 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 UBE2IP63279 158 aaKnown RBP20.71■□□□□ 0.91
CDKN3-204ENST00000442975 CFHR1Q03591 330 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 OASLQ15646 514 aaKnown RBP20.71■□□□□ 0.91
CDKN3-204ENST00000442975 TMEM220Q6QAJ8 160 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 C11orf96Q7Z7L8 435 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 AMZ2Q86W34 360 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 TRIM58Q8NG06 486 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 UBE2Q2Q8WVN8 375 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 NCSTNQ92542 709 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 RTP4Q96DX8 246 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 FCRL3Q96P31 734 aaPredicted RBP20.71■□□□□ 0.91
CDKN3-204ENST00000442975 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.71■□□□□ 0.91
CDKN3-204ENST00000442975 FAM96AQ9H5X1 160 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 ARNT2Q9HBZ2 717 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.71■□□□□ 0.91
CDKN3-204ENST00000442975 PPP2R2CQ9Y2T4 447 aa20.71■□□□□ 0.91
CDKN3-204ENST00000442975 CCDC78A2IDD5 438 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 E7EVH7 732 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 HGSO14964 777 aaPredicted RBP20.7■□□□□ 0.9
CDKN3-204ENST00000442975 POP7O75817 140 aaKnown RBP20.7■□□□□ 0.9
CDKN3-204ENST00000442975 THRAP10827 490 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 HADHAP40939 763 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 EPHA4P54764 986 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 CXADRP78310 365 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 MSLNQ13421 630 aaPredicted RBP20.7■□□□□ 0.9
CDKN3-204ENST00000442975 ZNF662Q6ZS27 426 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 BEND7Q8N7W2 519 aaPredicted RBP20.7■□□□□ 0.9
CDKN3-204ENST00000442975 CCDC89Q8N998 374 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 CXorf40BQ96DE9 158 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 CCDC97Q96F63 343 aaPredicted RBP20.7■□□□□ 0.9
CDKN3-204ENST00000442975 DCUN1D1Q96GG9 259 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 DPYSL5Q9BPU6 564 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 GRPEL1Q9HAV7 217 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 KLHL3Q9UH77 587 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 PCDHGA7Q9Y5G6 932 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 SCN8AQ9UQD0 1980 aa20.7■□□□□ 0.9
CDKN3-204ENST00000442975 NBEAQ8NFP9 2946 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PRAMEF33A0A0G2JMD5 474 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 LILRA5A6NI73 299 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PSMD3O43242 534 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 LDB2O43679 373 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PRAMEF10O60809 474 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 CCL4P13236 92 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 BRAFP15056 766 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 STIP1P31948 543 aaKnown RBP20.69■□□□□ 0.9
CDKN3-204ENST00000442975 MC4RP32245 332 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 CSTF2P33240 577 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDKN3-204ENST00000442975 HALP42357 657 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 XIAPP98170 497 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 TRA2AQ13595 282 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDKN3-204ENST00000442975 TMEM71Q6P5X7 295 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 MICALCLQ6ZW33 695 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PRUNE1Q86TP1 453 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 FAM129CQ86XR2 697 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 DNAAF3Q8N9W5 541 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 USP7Q93009 1102 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 ULK4Q96C45 1275 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 SGF29Q96ES7 293 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 POT1Q9NUX5 634 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 FOXJ2Q9P0K8 574 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 ZNF624Q9P2J8 865 aaPredicted RBP20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PSMD13Q9UNM6 376 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 SLC30A1Q9Y6M5 507 aa20.69■□□□□ 0.9
CDKN3-204ENST00000442975 ARHGEF17Q96PE2 2063 aaPredicted RBP20.69■□□□□ 0.9
CDKN3-204ENST00000442975 PRR19A6NJB7 356 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 A8MU76 341 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 FGGP02679 453 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 RALBP11234 206 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 TYRP1P17643 537 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 SLC19A1P41440 591 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 TMPRSS3P57727 454 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 SQSTM1Q13501 440 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 NFE2L1Q14494 772 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 ZRANB3Q5FWF4 1079 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 AGAP9Q5VTM2 703 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 PPP1R21Q6ZMI0 780 aa20.68■□□□□ 0.9
CDKN3-204ENST00000442975 FAM83HQ6ZRV2 1179 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms