RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 FAM220BPB1ANY3 271 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 H3BNH8 94 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PENKP01210 267 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 LRG1P02750 347 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CATP04040 527 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ALOX15P16050 662 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PBLDP30039 288 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 HOXA11P31270 313 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PTGER3P43115 390 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 DUSP4Q13115 394 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CBX3Q13185 183 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 STARD3Q14849 445 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 NCF4Q15080 339 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 FAM174BQ3ZCQ3 159 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 USP45Q70EL2 814 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SIDT2Q8NBJ9 832 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 KBTBD8Q8NFY9 601 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 NSMCE3Q96MG7 304 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PRICKLE1Q96MT3 831 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 COPS8Q99627 209 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CGREF1Q99674 301 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 AARSD1Q9BTE6 412 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MRPL9Q9BYD2 267 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ZIM2Q9NZV7 527 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 H2AFY2Q9P0M6 372 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MAPRE3Q9UPY8 281 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 KCTD3Q9Y597 815 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 DLEC1Q9Y238 1755 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 A0A1W2PPW3 197 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PRORSD1PA6NEY8 169 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SNTNA6NMZ2 147 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 RGS10O43665 173 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ACSL4O60488 711 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TBL1XO60907 577 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 MFN2O95140 757 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CLIC3O95833 236 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 F2P00734 622 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 URODP06132 367 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT1A6P19224 532 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT1A1P22309 533 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT1A4P22310 534 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 GPC1P35052 558 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT1A3P35503 534 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT1A5P35504 534 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CRATP43155 626 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 KIR3DL1P43629 444 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 LEPRP48357 1165 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ENTPD1P49961 510 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TAF1AQ15573 450 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF792Q3KQV3 632 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PPP4R4Q6NUP7 873 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 FBXL22Q6P050 247 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 UGT2A3Q6UWM9 527 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PAGE2Q7Z2X7 111 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 GLB1L3Q8NCI6 653 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 FBXL20Q96IG2 436 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 APOLD1Q96LR9 279 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 GPATCH1Q9BRR8 931 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ABCG8Q9H221 673 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ATP13A3Q9H7F0 1226 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 MEAF6Q9HAF1 191 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 PCDH12Q9NPG4 1184 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CCM2LQ9NUG4 571 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM9Q9P0T7 183 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 BTAF1O14981 1849 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CXCR6O00574 342 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 NIPSNAP2O75323 286 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 MAGEA3P43357 314 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 SMAD3P84022 425 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CACNG1Q06432 222 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CYP4F3Q08477 520 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TAPT1Q6NXT6 567 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CYP20A1Q6UW02 462 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 KRT73Q86Y46 540 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TTC30BQ8N4P2 665 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 KIAA1191Q96A73 305 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM74Q96NL1 305 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 KCNA7Q96RP8 456 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ZFYVE1Q9HBF4 777 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 RASSF1Q9NS23 344 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TNRC6CQ9HCJ0 1690 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 EFCAB10A6NFE3 127 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 H3BN98 237 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 CDC7O00311 574 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 NOBOXO60393 691 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 NDUFS2O75306 463 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 ATP6V1G1O75348 118 aa6.61□□□□□ -1.35
CSDE1-205ENST00000438362 RSL1D1O76021 490 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 FADS2O95864 444 aaKnown RBP6.61□□□□□ -1.35
CSDE1-205ENST00000438362 TBX18O95935 607 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms