RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DPYSL5Q9BPU6 564 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 CASS4Q9NQ75 786 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 WASH6PQ9NQA3 447 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 PRDM8Q9NQV8 689 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 KCNK4Q9NYG8 393 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 ATXN7L1Q9ULK2 861 aaPredicted RBP16■□□□□ 0.15
SMPD4-207ENST00000435455 SNX12Q9UMY4 172 aa16■□□□□ 0.15
SMPD4-207ENST00000435455 IGHV1OR21-1A0A087WYE8 117 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 TRBV5-4A0A0C4DH59 114 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 AP3B1O00203 1094 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 TAF4O00268 1085 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 CCL22O00626 93 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 POP7O75817 140 aaKnown RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 DXOO77932 396 aaKnown RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 MPOP05164 745 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 CD1CP29017 333 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 MC4RP32245 332 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 CTSCP53634 463 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 BASP1P80723 227 aaKnown RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 DMPKQ09013 629 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 EIF3IQ13347 325 aaKnown RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 GSE1Q14687 1217 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 ZRANB3Q5FWF4 1079 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 C3orf38Q5JPI3 329 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 FNBP1LQ5T0N5 605 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 IGF2-ASQ6U949 168 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 NLRP9Q7RTR0 991 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 B3GNT8Q7Z7M8 397 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 CDKN2AIPNLQ96HQ2 116 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 MS4A14Q96JA4 679 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 RANBP9Q96S59 729 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 SLC38A3Q99624 504 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 COPS8Q99627 209 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-207ENST00000435455 EPB41L5Q9HCM4 733 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 CPNE7Q9UBL6 633 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 RIMKLBQ9ULI2 386 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 PIKFYVEQ9Y2I7 2098 aa15.99■□□□□ 0.15
SMPD4-207ENST00000435455 GOLGA6L10A0A0M3HER8 536 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 OR2AG2A6NM03 316 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 XRCC1P18887 633 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 ADRA1DP25100 572 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 MLLT3P42568 568 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 EPHA4P54764 986 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 UBE2IP63279 158 aaKnown RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 CACNG1Q06432 222 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 ZFP36L1Q07352 338 aaKnown RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 BCL7AQ4VC05 210 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC38Q502W7 563 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 TSTD2Q5T7W7 516 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 ABRAXAS1Q6UWZ7 409 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 TAS2R42Q7RTR8 314 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 SLITRK4Q8IW52 837 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 TRIM48Q8IWZ4 208 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 OR10G6Q8NH81 332 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 SGF29Q96ES7 293 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 AHCYL2Q96HN2 611 aaKnown RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 ZNF578Q96N58 590 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-207ENST00000435455 AP1M1Q9BXS5 423 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 FOXP3Q9BZS1 431 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 EPB41L1Q9H4G0 881 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 FAM96AQ9H5X1 160 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 UCK1Q9HA47 277 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 ZDHHC3Q9NYG2 299 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 SATB2Q9UPW6 733 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 PCDHGA8Q9Y5G5 932 aa15.98■□□□□ 0.15
SMPD4-207ENST00000435455 IGLV3-16A0A075B6K0 115 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 LILRA5A6NI73 299 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 DUX1O43812 170 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 VIPP01282 170 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TCP1P17987 556 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 ACRV1P26436 265 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RBMS1P29558 406 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 COILP38432 576 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 GRIA1P42261 906 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 HALP42357 657 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 PPM1FP49593 454 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 SEPT7Q16181 437 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 CYP1B1Q16678 543 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TBC1D25Q3MII6 688 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TTC27Q6P3X3 843 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 USP53Q70EK8 1073 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 DET1Q7L5Y6 550 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RAB11FIP2Q7L804 512 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 SERPINA9Q86WD7 417 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RBM12BQ8IXT5 1001 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 PPHLN1Q8NEY8 458 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 SNIP1Q8TAD8 396 aaKnown RBP15.97■□□□□ 0.15
SMPD4-207ENST00000435455 COG1Q8WTW3 980 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 FGF11Q92914 225 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 PEX13Q92968 403 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.97■□□□□ 0.156e-7■■■□□ 15.7
SMPD4-207ENST00000435455 TMEM159Q96B96 161 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RDH14Q9HBH5 336 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 RAXQ9Y2V3 346 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TCAF1Q9Y4C2 921 aa15.97■□□□□ 0.15
SMPD4-207ENST00000435455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms