RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SLC9A8Q9Y2E8 581 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 KCNE2Q9Y6J6 123 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 RGS14O43566 566 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 RNGTTO60942 597 aaKnown RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 BMP10O95393 424 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 GKN2Q86XP6 184 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 LRRC34Q8IZ02 419 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 TERB1Q8NA31 727 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 HEBP1Q9NRV9 189 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 OBP2AQ9NY56 170 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 KLHL3Q9UH77 587 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 SEC22BO75396 215 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 ATP12AP54707 1039 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 TTMPQ5BVD1 217 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 LUZP2Q86TE4 346 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PGM2Q96G03 612 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 TPD52L3Q96J77 140 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 BCL2L14Q9BZR8 327 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 VTI1BQ9UEU0 232 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 SUSD2Q9UGT4 822 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 GSDMCQ9BYG8 508 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 SLC40A1Q9NP59 571 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 SLCO3A1Q9UIG8 710 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 VPS4BO75351 444 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 MLYCDO95822 493 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 SHBGP04278 402 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 LAMP2P13473 410 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 GAREM2Q75VX8 874 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF689Q96CS4 500 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PAPOLBQ9NRJ5 636 aaKnown RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 GPN3Q9UHW5 284 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 ACP5P13686 325 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 TNK2Q07912 1038 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PKDCCQ504Y2 493 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 MPP7Q5T2T1 576 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 KRT77Q7Z794 578 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 ADGRD2Q7Z7M1 963 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 GATAD2AQ86YP4 633 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 CAMKK1Q8N5S9 505 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 RDH11Q8TC12 318 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-207ENST00000429896 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
PTCH1-207ENST00000429896 OAS1P00973 400 aaKnown RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 CHRNA6Q15825 494 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 IL27RAQ6UWB1 636 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 C17orf64Q86WR6 236 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SCML1Q9UN30 329 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 CCDC162PA2VCL2 907 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 NEMP2A6NFY4 417 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 KLHL41O60662 606 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SIN3BO75182 1162 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 MYBL2P10244 700 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SLC6A4P31645 630 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SUOXP51687 545 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 LRRTM4Q86VH4 590 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 B4DGG1 531 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 ALBP02768 609 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 NPAS3Q8IXF0 933 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 AGGF1Q8N302 714 aaeCLIP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 CLIP3Q96DZ5 547 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 C12orf66Q96MD2 445 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 HAO1Q9UJM8 370 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 ENO2P09104 434 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 MAPK10P53779 464 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 GPR135Q8IZ08 494 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 MSANTD3Q96H12 275 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 TPSD1Q9BZJ3 242 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 MAFKO60675 156 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 VAV1P15498 845 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SERPINB3P29508 390 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SOX9P48436 509 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 RAB6CQ53S08 254 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 LPCAT2Q7L5N7 544 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 RAB6CQ9H0N0 254 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SRMSQ9H3Y6 488 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SGTAO43765 313 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A9O60656 530 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 PIAS1O75925 651 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A6P19224 532 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A1P22309 533 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A4P22310 534 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A3P35503 534 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 UGT1A5P35504 534 aa12.78□□□□□ -0.36
PTCH1-207ENST00000429896 ZC3H14Q6PJT7 736 aaKnown RBP12.78□□□□□ -0.36
PTCH1-207ENST00000429896 SIDT2Q8NBJ9 832 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms