RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ACAD10Q6JQN1 1059 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 IRGCQ6NXR0 463 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CYB5D1Q6P9G0 228 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CRTC3Q6UUV7 619 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 TMCO3Q6UWJ1 677 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 TMTC1Q8IUR5 882 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 TRIM48Q8IWZ4 208 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 SRRM1Q8IYB3 904 aaKnown RBP9.39□□□□□ -0.91
RFFL-203ENST00000413582 TEX26Q8N6G2 289 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 FDCSPQ8NFU4 85 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ADAMTS17Q8TE56 1095 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PNPLA2Q96AD5 504 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 SLC41A2Q96JW4 573 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 C5orf34Q96MH7 638 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 FCRL4Q96PJ5 515 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CSPG4P5Q96PW8 444 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 NUDT9Q9BW91 350 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PDE7BQ9NP56 450 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 NT5MQ9NPB1 228 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 SLAMF7Q9NQ25 335 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 EPHA6Q9UF33 1036 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 SLC23A2Q9UGH3 650 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 RARRES3Q9UL19 164 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 BZW2Q9Y6E2 419 aaKnown RBP9.39□□□□□ -0.91
RFFL-203ENST00000413582 CNTRLQ7Z7A1 2325 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ADGRG4Q8IZF6 3080 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CCDC168Q8NDH2 2452 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ZGRF1Q86YA3 2104 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 FER1L5A0AVI2 2057 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 CELSR1Q9NYQ6 3014 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 IGHV5-51A0A0C4DH38 117 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 C1orf232A0A0U1RR37 186 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 SSU72P8A0A1W2PR75 194 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 OR52A4PA6NMU1 304 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 PDZK1P1A8MUH7 402 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 CHUKO15111 745 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 RNF8O76064 485 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 MTA2O94776 668 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 CBX6O95503 412 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 LPOP22079 712 aaPredicted RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 IL1R2P27930 398 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 RPS15P62841 145 aaKnown RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 DSC2Q02487 901 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 SEPT7Q16181 437 aaKnown RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 SMTNL2Q2TAL5 461 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 ZRANB3Q5FWF4 1079 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 ZNF517Q6ZMY9 492 aaPredicted RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 IRF2BP2Q7Z5L9 587 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 POLNQ7Z5Q5 900 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 HPS6Q86YV9 775 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 RHOT1Q8IXI2 618 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 LPCAT1Q8NF37 534 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 NSMCE1Q8WV22 266 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 C19orf60Q96EN9 201 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 ZDHHC12Q96GR4 267 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 SYT11Q9BT88 431 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 RAB33BQ9H082 229 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 OR2AG1Q9H205 316 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 FAM83DQ9H4H8 585 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 PARVAQ9NVD7 372 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 CHKBQ9Y259 395 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 FARSAQ9Y285 508 aaKnown RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 SLC5A6Q9Y289 635 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
RFFL-203ENST00000413582 ITPR3Q14573 2671 aa9.38□□□□□ -0.91
RFFL-203ENST00000413582 GPR89AB7ZAQ6 455 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 CPNE3O75131 537 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 EBLN1P0CF75 366 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 GPR89BP0CG08 455 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 PRF1P14222 555 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 TCF4P15884 667 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 FERP16591 822 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 SERPINB6P35237 376 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 ARL4AP40617 200 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 PRKCIP41743 596 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 RPL26P61254 145 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 GPS2Q13227 327 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 INSCQ1MX18 579 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 IZUMO3Q5VZ72 239 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 ABRAXAS1Q6UWZ7 409 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 CERS6Q6ZMG9 384 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 ADGRG6Q86SQ4 1221 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 CCDC170Q8IYT3 715 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.37□□□□□ -0.91
RFFL-203ENST00000413582 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 UBXN4Q92575 508 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 MAML1Q92585 1016 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 SNRNP40Q96DI7 357 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 ZNF514Q96K75 400 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms