RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KRBA1A5PL33 1030 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PSMD11O00231 422 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ACOT8O14734 319 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PFDN6O15212 129 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 INSIG1O15503 277 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 AVILO75366 819 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 BCAS2O75934 225 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 RSL1D1O76021 490 aaKnown RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 ADH1AP07327 375 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PRR35P0CG20 571 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ATF4P18848 351 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 CD247P20963 164 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ARL1P40616 181 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 GRIA1P42261 906 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 GSSP48637 474 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ARPC4P59998 168 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 RAB10P61026 200 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PEX6Q13608 980 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 OXA1LQ15070 435 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 KCNJ8Q15842 424 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 FXNQ16595 210 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 DDR2Q16832 855 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TECRLQ5HYJ1 363 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SIRPB2Q5JXA9 342 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ANKRD26P1Q6NSI1 321 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 C16orf46Q6P387 395 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ZNF765Q7L2R6 523 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 DNAJB7Q7Z6W7 309 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 CPNE9Q8IYJ1 553 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CENPLQ8N0S6 344 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 PHTF2Q8N3S3 785 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ATAD1Q8NBU5 361 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 OR52K1Q8NGK4 314 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 WFIKKN2Q8TEU8 576 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 THAP11Q96EK4 314 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CNDP2Q96KP4 475 aaKnown RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 KLHL32Q96NJ5 620 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SERPINI1Q99574 410 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 DERL2Q9GZP9 239 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 RNF208Q9H0X6 261 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 RDH14Q9HBH5 336 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SNX15Q9NRS6 342 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 RIC8BQ9NVN3 520 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ASIC5Q9NY37 505 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TBC1D14Q9P2M4 693 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 KLHL3Q9UH77 587 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 BCAP29Q9UHQ4 241 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CDC14AQ9UNH5 594 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 A6NCN8 305 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 NPC1O15118 1278 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ZBTB14O43829 449 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SNAP91O60641 907 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 AGR2O95994 175 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CBSLP0DN79 551 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 XRCC1P18887 633 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 TTKP33981 857 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CBSP35520 551 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TIE1P35590 1138 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 GJC1P36383 396 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 MAPK9P45984 424 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SLC1A6P48664 564 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 THOP1P52888 689 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 C21orf58P58505 322 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 MS4A2Q01362 244 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 DUSP4Q13115 394 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SEPT6Q14141 434 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 FLOT2Q14254 428 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CYP2A13Q16696 494 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 FAAH2Q6GMR7 532 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 EPGNQ6UW88 154 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 ZCCHC23Q6ZST2 131 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SLC22A9Q8IVM8 553 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 MFSD6LQ8IWD5 586 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TP53INP2Q8IXH6 220 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PELI3Q8N2H9 469 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 STK40Q8N2I9 435 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 GOLM1Q8NBJ4 401 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 VPS39Q96JC1 886 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 NPLQ9BXD5 320 aaPredicted RBP5.31□□□□□ -1.56
VPS41-203ENST00000395969 MROQ9BYG7 248 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 TMEM39AQ9NV64 488 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 DZANK1Q9NVP4 752 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 RBM22Q9NW64 420 aaKnown RBP eCLIP5.31□□□□□ -1.562e-13■■■■■ 59.6
VPS41-203ENST00000395969 GID8Q9NWU2 228 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 PCDHB1Q9Y5F3 818 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 CORINQ9Y5Q5 1042 aa5.31□□□□□ -1.56
VPS41-203ENST00000395969 A0A087WXM4 84 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 H3BMM5 538 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PIK3R2O00459 728 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TEX28O15482 410 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LYPLA1O75608 230 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 FGF18O76093 207 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 JCHAINP01591 159 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 600.4 ms