RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 SPATA19Q7Z5L4 167 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 GALNT12Q8IXK2 581 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 SYTL1Q8IYJ3 562 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 NDRG1Q92597 394 aaKnown RBP16.03■□□□□ 0.16
CHD1L-203ENST00000369259 ISG20Q96AZ6 181 aaKnown RBP16.03■□□□□ 0.16
CHD1L-203ENST00000369259 KCNA7Q96RP8 456 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 C6orf62Q9GZU0 229 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-203ENST00000369259 BTRCQ9Y297 605 aa16.03■□□□□ 0.16
CHD1L-203ENST00000369259 BCKDKO14874 412 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 NPPAP01160 153 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 CYBBP04839 570 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 FYNP06241 537 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 CD36P16671 472 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 IFNA8P32881 189 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 UGT2B10P36537 528 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 MRPL19P49406 292 aaKnown RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 CLCN5P51795 746 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 POLR2JP52435 117 aaKnown RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 TPI1P60174 286 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 STXBP2Q15833 593 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 INTS6LQ5JSJ4 861 aaKnown RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 B3GNT8Q7Z7M8 397 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 ISCA2Q86U28 154 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 GATAD2AQ86YP4 633 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 PARP16Q8N5Y8 322 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 FRS2Q8WU20 508 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 CARS2Q9HA77 564 aaKnown RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 TM9SF3Q9HD45 589 aa16.02■□□□□ 0.16
CHD1L-203ENST00000369259 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-203ENST00000369259 M0QYT0 321 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 SLC22A3O75751 556 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 CYP11A1P05108 521 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 GGT1P19440 569 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 FMO3P31513 532 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 GGT5P36269 586 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 UFM1P61960 85 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 RAPSNQ13702 412 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 TPRG1LQ5T0D9 272 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.15
CHD1L-203ENST00000369259 CES5AQ6NT32 575 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 UBQLNLQ8IYU4 475 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 ABI1Q8IZP0 508 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 IRF2BPLQ9H1B7 796 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 SLA2Q9H6Q3 261 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 TREX1Q9NSU2 369 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 AIG1Q9NVV5 245 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 SCN3BQ9NY72 215 aa16.02■□□□□ 0.15
CHD1L-203ENST00000369259 AAR2Q9Y312 384 aaKnown RBP16.02■□□□□ 0.15
CHD1L-203ENST00000369259 IGKV6-21A0A0C4DH24 114 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 ZSCAN5BA6NJL1 495 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 FADS2O95864 444 aaKnown RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 MT-ND2P03891 347 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 IQCF3P0C7M6 154 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 TGFBR2P37173 567 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 CLK1P49759 484 aaKnown RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 FCGRTP55899 365 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 MVKQ03426 396 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 PRKCDQ05655 676 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 LAPTM5Q13571 262 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 HECTD2Q5U5R9 776 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 DENND5AQ6IQ26 1287 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 NEK5Q6P3R8 708 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 BNIPLQ7Z465 357 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 KLHDC8BQ8IXV7 354 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 FAM86B1Q8N7N1 296 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 OR6B3Q8NGW1 331 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 GRPEL2Q8TAA5 225 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 NT5C3BQ969T7 300 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 NPY6RQ99463 290 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 ACOT13Q9NPJ3 140 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 FBXL12Q9NXK8 326 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 WBP11Q9Y2W2 641 aaKnown RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 A3GALT2U3KPV4 340 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 UBA1P22314 1058 aaKnown RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 PRKACGP22612 351 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 ENPP6Q6UWR7 440 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 PTGR2Q8N8N7 351 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 SETD9Q8NE22 299 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 IPMKQ8NFU5 416 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 HSFY1Q96LI6 401 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 REXO4Q9GZR2 422 aaKnown RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 ZBTB20Q9HC78 741 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 SMPD4Q9NXE4 827 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-203ENST00000369259 BOLA1Q9Y3E2 137 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 ORC6Q9Y5N6 252 aa16.01■□□□□ 0.15
CHD1L-203ENST00000369259 SIX3O95343 332 aaPredicted RBP16■□□□□ 0.15
CHD1L-203ENST00000369259 FTH1P02794 183 aa16■□□□□ 0.15
CHD1L-203ENST00000369259 UBL4AP11441 157 aa16■□□□□ 0.15
CHD1L-203ENST00000369259 ADRA1BP35368 520 aa16■□□□□ 0.15
CHD1L-203ENST00000369259 NKG7Q16617 165 aa16■□□□□ 0.15
CHD1L-203ENST00000369259 RFX4Q33E94 735 aa16■□□□□ 0.15
CHD1L-203ENST00000369259 ZC3H12BQ5HYM0 836 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms