RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 MYO9BQ13459 2157 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 C1orf232A0A0U1RR37 186 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 LCHNA4D1U4 455 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PRRG1O14668 218 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 LRATO95237 230 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 GJA1P17302 382 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 GPR17Q13304 367 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 TSTA3Q13630 321 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 IMPG1Q17R60 797 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 RFTN2Q52LD8 501 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ANKRD34AQ69YU3 496 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 CCDC117Q8IWD4 279 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 SCML4Q8N228 414 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 FIBCD1Q8N539 461 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 DDI1Q8WTU0 396 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 AURKBQ96GD4 344 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 ZNF597Q96LX8 424 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 NSMCE2Q96MF7 247 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PSKH2Q96QS6 385 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 SLC22A12Q96S37 553 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 ADGRE3Q9BY15 652 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 CLPBQ9H078 707 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 RPF2Q9H7B2 306 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 POLR1BQ9H9Y6 1135 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 CLK4Q9HAZ1 481 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 SDR39U1Q9NRG7 319 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 PNPLA3Q9NST1 481 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 DUS2Q9NX74 493 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 NDUFA13Q9P0J0 144 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 EBF1Q9UH73 591 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ANAPC2Q9UJX6 822 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ZFC3H1O60293 1989 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 KNL1Q8NG31 2342 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 IGLV3-10A0A075B6K4 115 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 A0A1W2PP18 115 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 DRGXA6NNA5 263 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PFDN6O15212 129 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 NOBOXO60393 691 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 SLC25A14O95258 325 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 ESRRBO95718 433 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 EOMESO95936 686 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 LDLRP01130 860 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ASLP04424 464 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ACADVLP49748 655 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PIGFQ07326 219 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 MERTKQ12866 999 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 TRAP1Q12931 704 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 GPR141Q7Z602 305 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 EPHX4Q8IUS5 362 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 DHRSXQ8N5I4 330 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 OR4F6Q8NGB9 312 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 OR10A6Q8NH74 314 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 MIPOL1Q8TD10 442 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 BCL7CQ8WUZ0 217 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 MYLIPQ8WY64 445 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PYCR2Q96C36 320 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 ROPN1LQ96C74 230 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 BIRC8Q96P09 236 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 TDRD1Q9BXT4 1180 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 CCDC90BQ9GZT6 254 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 PREBQ9HCU5 417 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 CCM2LQ9NUG4 571 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 NLE1Q9NVX2 485 aaPredicted RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 WWOXQ9NZC7 414 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 TRPM5Q9NZQ8 1165 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 LIMD1Q9UGP4 676 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
CD46-205ENST00000358170 PCTPQ9UKL6 214 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 DMTF1Q9Y222 760 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 GPR45Q9Y5Y3 372 aa8.17□□□□□ -1.1
CD46-205ENST00000358170 MAGEB3O15480 346 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 SMAD6O43541 496 aaKnown RBP8.16□□□□□ -1.1
CD46-205ENST00000358170 MAN1A2O60476 641 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 AOC2O75106 756 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 SEC22BO75396 215 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 VNN2O95498 520 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 PRAMEF1O95521 474 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 CDH2P19022 906 aaPredicted RBP8.16□□□□□ -1.1
CD46-205ENST00000358170 PRKACGP22612 351 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 DNAJB1P25685 340 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 CA5AP35218 305 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 MAPKAPK2P49137 400 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 ZNF140P52738 457 aaPredicted RBP8.16□□□□□ -1.1
CD46-205ENST00000358170 PRKG2Q13237 762 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 ABRAXAS2Q15018 415 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 TAF1AQ15573 450 aaPredicted RBP8.16□□□□□ -1.1
CD46-205ENST00000358170 CTSL3PQ5NE16 218 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 TXNDC8Q6A555 127 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 TBPL2Q6SJ96 375 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 GCNT7Q6ZNI0 430 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 KLHDC8BQ8IXV7 354 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 PHACTR4Q8IZ21 702 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
CD46-205ENST00000358170 NKAPQ8N5F7 415 aaKnown RBP8.16□□□□□ -1.1
CD46-205ENST00000358170 ARL14EPQ8N8R7 260 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms