RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CPT1BQ92523 772 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 SLCO2A1Q92959 643 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 GRAMD1AQ96CP6 724 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 LINC00615Q96LM1 132 aaPredicted RBP21.74■■□□□ 1.07
SNX3-202ENST00000349379 NRSN2Q9GZP1 204 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 SARS2Q9NP81 518 aaKnown RBP21.74■■□□□ 1.07
SNX3-202ENST00000349379 WASH6PQ9NQA3 447 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 PRDM8Q9NQV8 689 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 ZDHHC3Q9NYG2 299 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 DKK4Q9UBT3 224 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 SLC2A6Q9UGQ3 507 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 PCDHB1Q9Y5F3 818 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 ENTPD2Q9Y5L3 495 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 WDFY3Q8IZQ1 3526 aa21.74■■□□□ 1.07
SNX3-202ENST00000349379 CCDC162PA2VCL2 907 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 OR2AG2A6NM03 316 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 RHPN2P1A8MT19 583 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 D6RAR5 112 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 NPY2RP49146 381 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 RTP5Q14D33 572 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 ZRANB3Q5FWF4 1079 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 PCID2Q5JVF3 399 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 AGAP9Q5VTM2 703 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 SERPINA9Q86WD7 417 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 PIANPQ8IYJ0 282 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 C17orf53Q8N3J3 647 aaPredicted RBP21.73■■□□□ 1.07
SNX3-202ENST00000349379 SGF29Q96ES7 293 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 SGSM3Q96HU1 749 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 COPS8Q99627 209 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 IL22Q9GZX6 179 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 DDX47Q9H0S4 455 aaKnown RBP21.73■■□□□ 1.07
SNX3-202ENST00000349379 OSGEPL1Q9H4B0 414 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 SCHIP1Q9P0W5 487 aaPredicted RBP21.73■■□□□ 1.07
SNX3-202ENST00000349379 DNAJC16Q9Y2G8 782 aa21.73■■□□□ 1.07
SNX3-202ENST00000349379 SNX2O60749 519 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 POP7O75817 140 aaKnown RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 TMEM63AO94886 807 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 BRAFP15056 766 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 VCLP18206 1134 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 PRLHRP49683 370 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 SESN2P58004 480 aaPredicted RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 UBE2IP63279 158 aaKnown RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 FNBP1LQ5T0N5 605 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 ANKRD22Q5VYY1 191 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 XKR5Q6UX68 686 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 AMZ2Q86W34 360 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 BEND7Q8N7W2 519 aaPredicted RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 Q8N9G6 341 aaPredicted RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 PPHLN1Q8NEY8 458 aaKnown RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 GFM1Q96RP9 751 aaKnown RBP21.72■■□□□ 1.07
SNX3-202ENST00000349379 TREX1Q9NSU2 369 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 BFARQ9NZS9 450 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 PCYOX1Q9UHG3 505 aa21.72■■□□□ 1.07
SNX3-202ENST00000349379 TRBV23OR9-2A0A075B6M9 112 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 KLHL33A6NCF5 533 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 OR51F1A6NGY5 319 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 CFAP99D6REC4 459 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 RALBP11234 206 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 IDSP22304 550 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 OR1D5P58170 312 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 HHEXQ03014 270 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 SQSTM1Q13501 440 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 DBN1Q16643 649 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 CLPPQ16740 277 aaPredicted RBP21.71■■□□□ 1.07
SNX3-202ENST00000349379 DET1Q7L5Y6 550 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 SLC9B2Q86UD5 537 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 AVL9Q8NBF6 648 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 MCUQ8NE86 351 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 HDAC10Q969S8 669 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 NXPE2Q96DL1 559 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 DCUN1D1Q96GG9 259 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 CAPZA3Q96KX2 299 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 MRM3Q9HC36 420 aaKnown RBP21.71■■□□□ 1.07
SNX3-202ENST00000349379 CHRAC1Q9NRG0 131 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 ZNF624Q9P2J8 865 aaPredicted RBP21.71■■□□□ 1.07
SNX3-202ENST00000349379 CPNE7Q9UBL6 633 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 ACACAQ13085 2346 aa21.71■■□□□ 1.07
SNX3-202ENST00000349379 MGAT4DA6NG13 374 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 GOT2P00505 430 aaKnown RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 ATP1B2P14415 290 aaPredicted RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 XRCC1P18887 633 aaPredicted RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 SLC19A1P41440 591 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 PTGIRP43119 386 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 CRADDP78560 199 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 ITIH4Q14624 930 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 ARMC3Q5W041 872 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 AFTPHQ6ULP2 937 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 FAM83HQ6ZRV2 1179 aaPredicted RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 CAND1Q86VP6 1230 aaKnown RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 NAT14Q8WUY8 206 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 KIFC1Q9BW19 673 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 SYNDIG1Q9H7V2 258 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 RNF14Q9UBS8 474 aa21.7■■□□□ 1.06
SNX3-202ENST00000349379 ATXN7L1Q9ULK2 861 aaPredicted RBP21.7■■□□□ 1.06
SNX3-202ENST00000349379 APC2O95996 2303 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 IGHV1OR21-1A0A087WYE8 117 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 CPNE6O95741 557 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 MLNP12872 115 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 MGAT1P26572 445 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 RPL10P27635 214 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms