RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 QKIQ96PU8 341 aaKnown RBP eCLIP12.23□□□□□ -0.45
SGCA-202ENST00000344627 PANX2Q96RD6 677 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 FCRL5Q96RD9 977 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 VAT1Q99536 393 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 FSD1LQ9BXM9 530 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 SPRY4Q9C004 299 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 TRABDQ9H4I3 376 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 GPN2Q9H9Y4 310 aaPredicted RBP12.23□□□□□ -0.45
SGCA-202ENST00000344627 OCIAD1Q9NX40 245 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 NFKBIL1Q9UBC1 381 aaPredicted RBP12.23□□□□□ -0.45
SGCA-202ENST00000344627 SLC23A2Q9UGH3 650 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 TRHDEQ9UKU6 1024 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 PKP3Q9Y446 797 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 BSNQ9UPA5 3926 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 LOC285095A0A1B0GVY8 99 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 POLR1CO15160 346 aaPredicted RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 KCNJ13O60928 360 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 NDUFA10O95299 355 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 LIFP15018 202 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 TYRP1P17643 537 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 AMD1P17707 334 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 VCLP18206 1134 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 RPL10P27635 214 aaKnown RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 RBL1P28749 1068 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 POLE2P56282 527 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 TMEM115Q12893 351 aaPredicted RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 MPP3Q13368 585 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 CHRNA6Q15825 494 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 ATP13A5Q4VNC0 1218 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 DARS2Q6PI48 645 aaKnown RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 TMTC1Q8IUR5 882 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 APOBEC4Q8WW27 367 aaKnown RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 SEC14L1Q92503 715 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
SGCA-202ENST00000344627 MRGPRX2Q96LB1 330 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 PLEKHG4BQ96PX9 1271 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 FICDQ9BVA6 458 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 RBSNQ9H1K0 784 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 HACD3Q9P035 362 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 KCTD3Q9Y597 815 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 DUSP10Q9Y6W6 482 aa12.22□□□□□ -0.45
SGCA-202ENST00000344627 TENM4Q6N022 2769 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 A6NCN8 305 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 CHUKO15111 745 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 STX7O15400 261 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A9O60656 530 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ANXA9O76027 345 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 STK10O94804 968 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 AGTP01019 485 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 EPOP01588 193 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 APOC2P02655 101 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 MT-ND3P03897 115 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 NTRK1P04629 796 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 XRCC1P18887 633 aaPredicted RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A6P19224 532 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 HLA-DPA1P20036 260 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 IDSP22304 550 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A1P22309 533 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A4P22310 534 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 PBLDP30039 288 aaPredicted RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 HMGCLP35914 325 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 SPAM1P38567 509 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 CASRP41180 1078 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ARSDP51689 593 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 DRG2P55039 364 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 GEMP55040 296 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 COPS2P61201 443 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 OTUD4Q01804 1114 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 XRCC4Q13426 336 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 PRPSAP1Q14558 356 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 IL11RAQ14626 422 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 CLCA4Q14CN2 919 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 SLC1A5Q15758 541 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 KHDC1Q4VXA5 237 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 ZDHHC20Q5W0Z9 365 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 BBS12Q6ZW61 710 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 BPHLQ86WA6 291 aaPredicted RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 TTC30BQ8N4P2 665 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 PMEPA1Q969W9 287 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 CXorf40BQ96DE9 158 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 CTRCQ99895 268 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 FAM118BQ9BPY3 351 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 TIMM29Q9BSF4 260 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ZCCHC2Q9C0B9 1178 aaKnown RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A7Q9HAW7 530 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A10Q9HAW8 530 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 UGT1A8Q9HAW9 530 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 IL26Q9NPH9 171 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms