RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SCIMPQ6UWF3 145 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 ZNF334Q9HCZ1 680 aaPredicted RBP12.69□□□□□ -0.38
LIN54-201ENST00000340417 ANLNQ9NQW6 1124 aa12.69□□□□□ -0.38
LIN54-201ENST00000340417 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 OGNP20774 298 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 GABRB2P47870 512 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 MPP1Q00013 466 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 LSM12Q3MHD2 195 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 LRRC23Q53EV4 343 aaPredicted RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 HEATR4Q86WZ0 1026 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 OXR1Q8N573 874 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 RLN3Q8WXF3 142 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 HSFX1Q9UBD0 423 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 XPR1Q9UBH6 696 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 IGFALSP35858 605 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NAGLUP54802 743 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 RPP38P78345 283 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 CYP4F3Q08477 520 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ZCCHC23Q6ZST2 131 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 MPP5Q8N3R9 675 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 SLC2A13Q96QE2 648 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 PBX1P40424 430 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ZNF234Q14588 700 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 TSACCQ96A04 125 aaPredicted RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 PPCDCQ96CD2 204 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 MFSD3Q96ES6 412 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 SLC17A9Q9BYT1 436 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ROGDIQ9GZN7 287 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 A0A0J9YVX5 310 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 SLC7A4O43246 635 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NTRK1P04629 796 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 IL1R2P27930 398 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 CD6P30203 668 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 Q6ZVL8 140 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 UBALD2Q8IYN6 164 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 RERGLQ9H628 205 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 INTS10Q9NVR2 710 aaKnown RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 B2RBV5 119 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 PEX11AO75192 247 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NOS3P29474 1203 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NUP107P57740 925 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 PLGLB1Q02325 96 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 ZNF155Q12901 538 aaPredicted RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 Q7L0L9 218 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 SPPL2AQ8TCT8 520 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NKD2Q969F2 451 aaPredicted RBP12.68□□□□□ -0.38
LIN54-201ENST00000340417 MCMBPQ9BTE3 642 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 BTRCQ9Y297 605 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
LIN54-201ENST00000340417 CCDC162PA2VCL2 907 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 OR5K4A6NMS3 321 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 FYNP06241 537 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 TRIM74Q86UV6 250 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 PROX1Q92786 737 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 THTPAQ9BU02 230 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 MARCH5Q9NX47 278 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 NUDT4Q9NZJ9 180 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 LBPP18428 481 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 GJA4P35212 333 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 CPNE9Q8IYJ1 553 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 TFGQ92734 400 aaPredicted RBP12.67□□□□□ -0.38
LIN54-201ENST00000340417 RASSF4Q9H2L5 321 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 PDE7BQ9NP56 450 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 SEMA3GQ9NS98 782 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 PGLSO95336 258 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 HNRNPA2B1P22626 353 aaKnown RBP12.67□□□□□ -0.38
LIN54-201ENST00000340417 ABHD13Q7L211 337 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 CXCL10P02778 98 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 NR2F1P10589 423 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 CPA2P48052 419 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 ERFP50548 548 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 SUOXP51687 545 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 ZNF132P52740 706 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 MANFP55145 182 aaKnown RBP12.67□□□□□ -0.38
LIN54-201ENST00000340417 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 B3GNT9Q6UX72 402 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
LIN54-201ENST00000340417 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
LIN54-201ENST00000340417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 A0A0U1RQJ8 604 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 UBXN7O94888 489 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 ETV3P41162 512 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 FAM189BP81408 668 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 FASTKQ14296 549 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 RTN4RL1Q86UN2 441 aaPredicted RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 TMEFF1Q8IYR6 380 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms