RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ESCO2Q56NI9 601 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 KDM4DQ6B0I6 523 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 LAMTOR1Q6IAA8 161 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CES5AQ6NT32 575 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TUBA3EQ6PEY2 450 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CMC1Q7Z7K0 106 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TRPV3Q8NET8 790 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 BEST2Q8NFU1 509 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TTLQ8NG68 377 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 GRPEL2Q8TAA5 225 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SPATA18Q8TC71 538 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SPPL2BQ8TCT7 592 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 GTF2H4Q92759 462 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PBXIP1Q96AQ6 731 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RNF31Q96EP0 1072 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 P2RY11Q96G91 374 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 REXO5Q96IC2 774 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SLC30A3Q99726 388 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM206Q9H813 350 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SNX15Q9NRS6 342 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 RAB6BQ9NRW1 208 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TBC1D13Q9NVG8 400 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 MARCH5Q9NX47 278 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TJP2Q9UDY2 1190 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CYTH4Q9UIA0 394 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 IRAK3Q9Y616 596 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CELSR3Q9NYQ7 3312 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 VPS13CQ709C8 3753 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 METTL15A6NJ78 407 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 LINC01387J3KSC0 135 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 C4BPAP04003 597 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 GSNP06396 782 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 HSD17B1P14061 328 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 GRK3P35626 688 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PIGAP37287 484 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SEPHS1P49903 392 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PTPN5P54829 565 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 DSTNP60981 165 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 CYP24A1Q07973 514 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SMARCB1Q12824 385 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 LIN9Q5TKA1 542 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SEL1L3Q68CR1 1132 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 LETMD1Q6P1Q0 360 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 OR7D4Q8NG98 312 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 JOSD2Q8TAC2 188 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 BPIFB1Q8TDL5 484 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 MARC2Q969Z3 335 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 FAF2Q96CS3 445 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PDLIM5Q96HC4 596 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 OSBPL2Q9H1P3 480 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 TM9SF3Q9HD45 589 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ITM2CQ9NQX7 267 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF302Q9NR11 478 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ABCB10Q9NRK6 738 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 INTS10Q9NVR2 710 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 NOSIPQ9Y314 301 aaKnown RBP5.54□□□□□ -1.52
CSDE1-202ENST00000339438 PCDHB3Q9Y5E6 796 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF318Q5VUA4 2279 aa5.54□□□□□ -1.52
CSDE1-202ENST00000339438 BDP1A6H8Y1 2624 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 DHRS12A0PJE2 317 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 TBX1O43435 398 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 NOL3O60936 208 aaKnown RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PSAPP07602 524 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 F7P08709 466 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 ACADMP11310 421 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 GFAPP14136 432 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PRKACAP17612 351 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 GTF2E2P29084 291 aaKnown RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 ALDH4A1P30038 563 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PBX2P40425 430 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 SOX9P48436 509 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 MASP1P48740 699 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 RARRES1P49788 294 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 AFF1P51825 1210 aaKnown RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 ISL1P61371 349 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 SNRPFP62306 86 aaKnown RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 MLLT1Q03111 559 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 C6orf141Q5SZD1 244 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 KIAA1324Q6UXG2 1013 aaKnown RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 BEND5Q7L4P6 421 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 GPR65Q8IYL9 337 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 TDHQ8IZJ6 230 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 SVOPQ8N4V2 548 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PARP16Q8N5Y8 322 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PLD5Q8N7P1 536 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 ZMIZ2Q8NF64 920 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 PJA1Q8NG27 643 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 ZNF566Q969W8 418 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 CDHR1Q96JP9 859 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 TM9SF2Q99805 663 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 CHID1Q9BWS9 393 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 FAM49AQ9H0Q0 323 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 POLMQ9NP87 494 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-202ENST00000339438 MAT2BQ9NZL9 334 aa5.53□□□□□ -1.52
CSDE1-202ENST00000339438 VANGL2Q9ULK5 521 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms