RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 ACTL8Q9H568 366 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 REEP1Q9H902 201 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 HSFX1Q9UBD0 423 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 INVSQ9Y283 1065 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 COL5A3P25940 1745 aaPredicted RBP7.28□□□□□ -1.24
EPHA3-201ENST00000336596 RGSL1A5PLK6 1076 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 BBIP1A8MTZ0 92 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 H0Y858 1186 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 MT-ND5P03915 603 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 SERPINB3P29508 390 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 HNRNPH3P31942 346 aaKnown RBP7.28□□□□□ -1.24
EPHA3-201ENST00000336596 CSKP41240 450 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 SLC1A6P48664 564 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 AMZ1Q400G9 498 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 FUT11Q495W5 492 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 RNF44Q7L0R7 432 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 PIWIL4Q7Z3Z4 852 aaKnown RBP7.28□□□□□ -1.24
EPHA3-201ENST00000336596 OR4A15Q8NGL6 344 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 TMEM74Q96NL1 305 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 FAM111AQ96PZ2 611 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 MUC13Q9H3R2 512 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 SERHL2Q9H4I8 314 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 TCF7L2Q9NQB0 619 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 SERHLQ9NQF3 203 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 EIF2B3Q9NR50 452 aaKnown RBP7.28□□□□□ -1.24
EPHA3-201ENST00000336596 SIRPGQ9P1W8 387 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 CKLFQ9UBR5 152 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 CA14Q9ULX7 337 aa7.28□□□□□ -1.24
EPHA3-201ENST00000336596 TMEM120BA0PK00 339 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TPH1P17752 444 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ARSFP54793 590 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 E2F1Q01094 437 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ZNF33AQ06730 810 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 AUHQ13825 339 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TEX44Q53QW1 395 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 MBOAT1Q6ZNC8 495 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ADGRG6Q86SQ4 1221 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ATCAYQ86WG3 371 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 AMIGO1Q86WK6 493 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 KBTBD2Q8IY47 623 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TEX47Q8TBZ9 253 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 MRPS26Q9BYN8 205 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 MMADHCQ9H3L0 296 aaPredicted RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 EXOSC4Q9NPD3 245 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 DDX18Q9NVP1 670 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 COPG2Q9UBF2 871 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TMPRSS11EQ9UL52 423 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 CLCA3PQ9Y6N3 262 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 SHANK3Q9BYB0 1731 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 A8MX80 341 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 GABRDO14764 452 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 CPN2P22792 545 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 RBL1P28749 1068 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 NTSR1P30989 418 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 GLRBP48167 497 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 MANFP55145 182 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 RPL7AP62424 266 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TXNL4AP83876 142 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 GALNT3Q14435 633 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TIMM50Q3ZCQ8 353 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 PTPN20Q4JDL3 420 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 N4BP2L1Q5TBK1 243 aaPredicted RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 VN1R5Q7Z5H4 357 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 APLFQ8IW19 511 aaPredicted RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TDHQ8IZJ6 230 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ZSCAN4Q8NAM6 433 aaPredicted RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 QKIQ96PU8 341 aaKnown RBP eCLIP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 WRAP53Q9BUR4 548 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TMEM120AQ9BXJ8 343 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ADAM33Q9BZ11 813 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 RSPH9Q9H1X1 276 aaPredicted RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 FBXW11Q9UKB1 542 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 GRXCR2A6NFK2 248 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 KCNK1O00180 336 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 AXIN1O15169 862 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 PMM2O15305 246 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 DNAJA2O60884 412 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 FASTKQ14296 549 aaKnown RBP7.27□□□□□ -1.25
EPHA3-201ENST00000336596 C9orf64Q5T6V5 341 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 KIAA0319Q5VV43 1072 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 BICRALQ6AI39 1079 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 TMEM220Q6QAJ8 160 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 CCDC80Q76M96 950 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 PLA2G15Q8NCC3 412 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 OR5L2Q8NGL0 311 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 OR4C15Q8NGM1 316 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 OR2AJ1Q8NGZ0 328 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 CENPTQ96BT3 561 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 B3GNT5Q9BYG0 378 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 SHCBP1LQ9BZQ2 653 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 MVB12BQ9H7P6 319 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 RNF121Q9H920 327 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 IL1RAPQ9NPH3 570 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 PCDHB16Q9NRJ7 776 aa7.27□□□□□ -1.25
EPHA3-201ENST00000336596 ZDHHC3Q9NYG2 299 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms