RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SLC17A9Q9BYT1 436 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 UGT1A7Q9HAW7 530 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PDFQ9HBH1 243 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 EML4Q9HC35 981 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FBRSL1Q9HCM7 1045 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF71Q9NQZ8 489 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 C1GALT1Q9NS00 363 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ACSS1Q9NUB1 689 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PAQR5Q9NXK6 330 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ANKRD10Q9NXR5 420 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GPRC5BQ9NZH0 403 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KCMF1Q9P0J7 381 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBK1Q9UHD2 729 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GDF2Q9UK05 429 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CORO1CQ9ULV4 474 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SPEF1Q9Y4P9 236 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3DA0A087WVF3 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3IA0A087WXS9 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3EA0A087X179 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3KA0A087X1G2 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC162PA2VCL2 907 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3FA6NER0 549 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 A6NL46 340 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KIAA1324LA8MWY0 1029 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3LB9A6J9 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 C9J4A7 227 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 K7ERI5 159 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RGS14O43566 566 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GAS7O60861 476 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SPAG6O75602 509 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 STK17BO94768 372 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PPP1R3DO95685 299 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3HP0C7X1 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MTHFD1P11586 935 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 HSD17B2P37059 387 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GSTM5P46439 218 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CXCR3P49682 368 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ARF3P61204 181 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF177Q13360 481 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CTTNQ14247 550 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 UGCGQ16739 394 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 UAP1L1Q3KQV9 507 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CHRFAM7AQ494W8 412 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TCTE1Q5JU00 501 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 C1orf185Q5T7R7 199 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3GQ6DHY5 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 OR2A2Q6IF42 318 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3CQ6IPX1 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RINT1Q6NUQ1 792 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KIAA1211LQ6NV74 962 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KRT74Q7RTS7 529 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ADAT2Q7Z6V5 191 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CDC20BQ86Y33 519 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CDKL3Q8IVW4 592 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D3Q8IZP1 549 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NAGSQ8N159 534 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TAB3Q8N5C8 712 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SPERTQ8NA61 448 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FANCBQ8NB91 859 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 VANGL1Q8TAA9 524 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NPRL2Q8WTW4 380 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF764Q96H86 408 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NDC1Q9BTX1 674 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GPR174Q9BXC1 333 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DUSP16Q9BY84 665 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CXorf56Q9H5V9 222 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NT5DC2Q9H857 520 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM248Q9NWD8 314 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SLC39A1Q9NY26 324 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GTSE1Q9NYZ3 720 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 STIM2Q9P246 746 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 POMT2Q9UKY4 750 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TCFL5Q9UL49 500 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 A4GNTQ9UNA3 340 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CYP8B1Q9UNU6 501 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NEU3Q9UQ49 428 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RNF215Q9Y6U7 377 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DDX49Q9Y6V7 483 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 C2orf92A0A1B0GVN3 265 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 A0A1B0GVY2 172 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 F8VZ95 297 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 POLR3GO15318 223 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SLC16A3O15427 465 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 B4GAT1O43505 415 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DNPH1O43598 174 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ACSL4O60488 711 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NMT2O60551 498 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SMPD2O60906 423 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF821O75541 412 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KLF7O75840 302 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 IDH1O75874 414 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 AP2A2O94973 939 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RCBTB2O95199 551 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 F9P00740 461 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ALDOAP04075 364 aaKnown RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms