RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 EFHBQ8N7U6 833 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 TNIP2Q8NFZ5 429 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 FNDC8Q8TC99 324 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 DERL2Q9GZP9 239 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 UTS2RQ9UKP6 389 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 PCDHGC4Q9Y5F7 938 aa12.19□□□□□ -0.46
VPS33B-201ENST00000333371 LCHNA4D1U4 455 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 MOXD2PA6NHM9 499 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 KATNA1O75449 491 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 EEDO75530 441 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ESRRBO95718 433 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TSPAN12O95859 305 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LDLRP01130 860 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 SLC6A4P31645 630 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PSMD7P51665 324 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ZNF140P52738 457 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LETMD1Q6P1Q0 360 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 RTN4RL1Q86UN2 441 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 MIPOL1Q8TD10 442 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TANKQ92844 425 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LINGO1Q96FE5 620 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TRIB3Q96RU7 358 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PAIP1Q9H074 479 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CARS2Q9HA77 564 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 NTN4Q9HB63 628 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 STARD7Q9NQZ5 370 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 IFT80Q9P2H3 777 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PLXNA4Q9HCM2 1894 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 OGNP20774 298 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 MATN1P21941 496 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 EEF1B2P24534 225 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 HOXD9P28356 352 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 GGT5P36269 586 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PIK3CGP48736 1102 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ERVPABLB-1P60509 514 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 GLYATQ6IB77 296 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 OGFOD2Q6N063 350 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 DTWD1Q8N5C7 304 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PDFQ9HBH1 243 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 FRMPD3Q5JV73 1810 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TRIM64A6NGJ6 449 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 SCAMP3O14828 347 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 NDST3O95803 873 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 HNRNPCP07910 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 G6PDP11413 515 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ZNF182P17025 639 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 NR4A1P22736 598 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 NUP107P57740 925 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 RPS24P62847 133 aaKnown RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PIGFQ07326 219 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LAPTM5Q13571 262 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 DHRS4L2Q6PKH6 230 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ABI1Q8IZP0 508 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LPCAT1Q8NF37 534 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ADAMTS16Q8TE57 1224 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 THAP11Q96EK4 314 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 SEPT5Q99719 369 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 ACTL8Q9H568 366 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 SYTL2Q9HCH5 934 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 TUBA8Q9NY65 449 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 FNIP2Q9P278 1114 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 CIDEBQ9UHD4 219 aa12.18□□□□□ -0.46
VPS33B-201ENST00000333371 LEF1Q9UJU2 399 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-201ENST00000333371 PDE4DIPQ5VU43 2346 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 DRGXA6NNA5 263 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 E2F3O00716 465 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 PRLP01236 227 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 UROSP10746 265 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 IL7RP16871 459 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 ADARB1P78563 741 aaKnown RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 MBTPS1Q14703 1052 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 PARP15Q460N3 678 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 GPRIN3Q6ZVF9 776 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 NLE1Q9NVX2 485 aaPredicted RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 HACD3Q9P035 362 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 PTBP2Q9UKA9 531 aaKnown RBP12.17□□□□□ -0.46
VPS33B-201ENST00000333371 BOLA2-SMG1P6H3BVE0 249 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 J3QRK9 145 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 UPK1AO00322 258 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 INPPL1O15357 1258 aa12.17□□□□□ -0.46
VPS33B-201ENST00000333371 CAPN1P07384 714 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms