RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 DENND2DQ9H6A0 471 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 MRPL42Q9Y6G3 142 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 RAB11FIP2Q7L804 512 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 AMIGO1Q86WK6 493 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 HDDC3Q8N4P3 179 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 AGO1Q9UL18 857 aaKnown RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ZNF510Q9Y2H8 683 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TBC1D3BA6NDS4 549 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 NME6O75414 186 aaPredicted RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 PIAS1O75925 651 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 AMHP03971 560 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 LINGO3P0C6S8 592 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 FAM76BQ5HYJ3 339 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC30A10Q6XR72 485 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 RASGEF1AQ8N9B8 481 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 C2orf71A6NGG8 1288 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 NCK1P16333 377 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TSPAN5P62079 268 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 MXD1Q05195 221 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 FBXO43Q4G163 708 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CNTRLQ7Z7A1 2325 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 SULT2A1Q06520 285 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CBLBQ13191 982 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 UBE2R2Q712K3 238 aaPredicted RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 POF1BQ8WVV4 589 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CEP295NLQ96MC4 621 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ASLP04424 464 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CD2P06729 351 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ATXN1P54253 815 aaKnown RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 SIM2Q14190 667 aaPredicted RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ZNF311Q5JNZ3 666 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 C1orf186Q6ZWK4 172 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CHIAQ9BZP6 476 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 C5orf51A6NDU8 294 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 LAMP2P13473 410 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 EML3Q32P44 896 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ATXN7L2Q5T6C5 722 aaPredicted RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 PRR23CQ6ZRP0 262 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TMPRSS11BQ86T26 416 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CACUL1Q86Y37 369 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 RASGEF1CQ8N431 466 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CEP76Q8TAP6 659 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 CCDC86Q9H6F5 360 aaKnown RBP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TFPIP10646 304 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 DDX6P26196 483 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 GRK5P34947 590 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 DCDC1P59894 354 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 ADAMTS15Q8TE58 950 aa16.72■□□□□ 0.27
SMCHD1-201ENST00000320876 TBX1O43435 398 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 TBL1XO60907 577 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 LAPTM5Q13571 262 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PHYKPLQ8IUZ5 450 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 SCGB3A2Q96PL1 93 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 TOR3AQ9H497 397 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 NUDT4Q9NZJ9 180 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CDH7Q9ULB5 785 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 KCNU1A8MYU2 1149 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 OR1I1O60431 355 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 RHEBQ15382 184 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CRTC2Q53ET0 693 aaPredicted RBP16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 MPP5Q8N3R9 675 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 FERD3LQ96RJ6 166 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 SPATA9Q9BWV2 254 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 FMO1Q01740 532 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 LCP2Q13094 533 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC25A52Q3SY17 297 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 KLHL35Q6PF15 583 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 ING5Q8WYH8 240 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 SPEF2Q9C093 1822 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 ITPKBP27987 946 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 RPL7AP62424 266 aaKnown RBP16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 C9orf64Q5T6V5 341 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 ANO7Q6IWH7 933 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 PCDHGB7Q9Y5F8 929 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CYP3A4P08684 503 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 CCNCP24863 283 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 AP2S1P53680 142 aaPredicted RBP16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 RTP1P59025 263 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 NRG1Q02297 640 aaPredicted RBP16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 EIPR1Q53HC9 387 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 TMEM17Q86X19 198 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 RIT1Q92963 219 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 AGAP2Q99490 1192 aa16.71■□□□□ 0.27
SMCHD1-201ENST00000320876 KCNQ2O43526 872 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms