RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DPYSL5Q9BPU6 564 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 UCK1Q9HA47 277 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 FKBPLQ9UIM3 349 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 DNAJC16Q9Y2G8 782 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 PCDHGA3Q9Y5H0 932 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 SLC30A1Q9Y6M5 507 aa19.5■□□□□ 0.71
PDZRN3-202ENST00000308537 TEX51A0A1B0GUA7 166 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 K7ENP7 123 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 ZW10O43264 779 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 LDB2O43679 373 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 LPOP22079 712 aaPredicted RBP19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 MAPK10P53779 464 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 UCNP55089 124 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 BIRC2Q13490 618 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 CLCA4Q14CN2 919 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 INO80CQ6PI98 192 aaPredicted RBP19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 FAM83HQ6ZRV2 1179 aaPredicted RBP19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 ZFAND4Q86XD8 727 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 JAMLQ86YT9 394 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 FAM71DQ8N9W8 422 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 OR13C4Q8NGS5 318 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 RTP4Q96DX8 246 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 OSGEPL1Q9H4B0 414 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 OCIAD1Q9NX40 245 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 PKP3Q9Y446 797 aa19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 MN1Q10571 1320 aaPredicted RBP19.49■□□□□ 0.71
PDZRN3-202ENST00000308537 BSNQ9UPA5 3926 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 OR52A4PA6NMU1 304 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 ATXN7O15265 892 aaPredicted RBP19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 STX7O15400 261 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 DUX1O43812 170 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 PRAMEF1O95521 474 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 SLC2A4P14672 509 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 RPL10P27635 214 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 CETN2P41208 172 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 DRG2P55039 364 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 VAC14Q08AM6 782 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 ITGA9Q13797 1035 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 OASLQ15646 514 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 LDLRAP1Q5SW96 308 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 ARHGAP40Q5TG30 622 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 TMEM26Q6ZUK4 368 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 TRAPPC5Q8IUR0 188 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 TTC13Q8NBP0 860 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 OR10G6Q8NH81 332 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 ZNF398Q8TD17 642 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 NAT14Q8WUY8 206 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 SH3KBP1Q96B97 665 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 C19orf43Q9BQ61 176 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 TBL1YQ9BQ87 522 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 TMEM121Q9BTD3 319 aa19.48■□□□□ 0.71
PDZRN3-202ENST00000308537 HELZ2Q9BYK8 2649 aaKnown RBP19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 GOLGA6L6A8MZA4 724 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 C1QL1O75973 258 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 SRP72O76094 671 aaKnown RBP19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 C9P02748 559 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 LIPCP11150 499 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 WT1P19544 449 aaPredicted RBP19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 SEPT7Q16181 437 aaKnown RBP19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 PARP6Q2NL67 630 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 BROXQ5VW32 411 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 TXLNBQ8N3L3 684 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 AGBL5Q8NDL9 886 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 ATG4AQ8WYN0 398 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 TTC9Q92623 222 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 FERMT1Q9BQL6 677 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 SPRY4Q9C004 299 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 SLC40A1Q9NP59 571 aa19.47■□□□□ 0.71
PDZRN3-202ENST00000308537 TLN1Q9Y490 2541 aaKnown RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 OR2AG2A6NM03 316 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 B4E171 279 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 POP7O75817 140 aaKnown RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 STK10O94804 968 aaKnown RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 PSMA3P25788 255 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 TSPAN7P41732 249 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 GFERP55789 205 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 PRPSAP1Q14558 356 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 SIX1Q15475 284 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 TMEM220Q6QAJ8 160 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 ZNF662Q6ZS27 426 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 BEND7Q8N7W2 519 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 GDAP1Q8TB36 358 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 EPB41L1Q9H4G0 881 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 POT1Q9NUX5 634 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 GUCA1BQ9UMX6 200 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 B3GALT1Q9Y5Z6 326 aa19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 DNMT3AQ9Y6K1 912 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-202ENST00000308537 ZNF462Q96JM2 2506 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 GOLGA6L9A6NEM1 432 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 C2orf81A6NN90 581 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 PDZK1P1A8MUH7 402 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 CCL22O00626 93 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 ARHGAP6O43182 974 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 KCNJ13O60928 360 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 ZNF189O75820 626 aaPredicted RBP19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 IDSP22304 550 aa19.45■□□□□ 0.7
PDZRN3-202ENST00000308537 GSDMDP57764 484 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms