RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 MFSD4BQ5TF39 518 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 STEAP4Q687X5 459 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 DNAJB8Q8NHS0 232 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 NLNQ9BYT8 704 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 ADAMTS10Q9H324 1103 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 YJEFN3A6XGL0 299 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 BOLA2-SMG1P6H3BVE0 249 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 CKMP06732 381 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 F7P08709 466 aaPredicted RBP19.13■□□□□ 0.65
USP48-201ENST00000308271 PBLDP30039 288 aaPredicted RBP19.13■□□□□ 0.65
USP48-201ENST00000308271 INCA1Q0VD86 236 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 TAS1R3Q7RTX0 852 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 FGD2Q7Z6J4 655 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 SLC34A3Q8N130 599 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 CRYBG2Q8N1P7 616 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 DPP10Q8N608 796 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 PPTC7Q8NI37 304 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 STON2Q8WXE9 905 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 EXOC2Q96KP1 924 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 FTHL17Q9BXU8 183 aa19.13■□□□□ 0.65
USP48-201ENST00000308271 SGTAO43765 313 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 SLC6A2P23975 617 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 CRYBB1P53674 252 aaPredicted RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 ZNF252P-AS1Q0IIN9 211 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 FLCNQ8NFG4 579 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 AURKBQ96GD4 344 aaPredicted RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 ADARB2Q9NS39 739 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 KRT87PA6NCN2 255 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 H0YAE9 185 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 FBP2O00757 339 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 UGT2B15P54855 530 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 LILRA4P59901 499 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 BICRALQ6AI39 1079 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 TMPRSS11AQ6ZMR5 421 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 RTL3Q8N8U3 475 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 ELMO1Q92556 727 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 UROC1Q96N76 676 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 CGREF1Q99674 301 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 TOR4AQ9NXH8 423 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 FAM240BA0A1B0GVZ2 78 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 MOXD2PA6NHM9 499 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 TFPTP0C1Z6 253 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 SERPINA4P29622 427 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 ALDH7A1P49419 539 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 FAM171A1Q5VUB5 890 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 MRPS31Q92665 395 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 KIFC1Q9BW19 673 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 KLHL1Q9NR64 748 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 EIF2B4Q9UI10 523 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 SNX10Q9Y5X0 201 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 PSMD11O00231 422 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 KPNA5O15131 536 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 CLIC3O95833 236 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 PBX3P40426 434 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 CHRNA4P43681 627 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 MAPK8P45983 427 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 FAM174BQ3ZCQ3 159 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 PIH1D2Q8WWB5 315 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 TRUB1Q8WWH5 349 aaKnown RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 ITPKCQ96DU7 683 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 CITED4Q96RK1 184 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 TPK1Q9H3S4 243 aa19.12■□□□□ 0.65
USP48-201ENST00000308271 ZNF214Q9UL59 606 aaPredicted RBP19.12■□□□□ 0.65
USP48-201ENST00000308271 ATXN8OSP0DMR3 200 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 IL18R1Q13478 541 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 DET1Q7L5Y6 550 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 ANKFN1Q8N957 763 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 NACC2Q96BF6 587 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 BIRC7Q96CA5 298 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 BTN2A3PQ96KV6 586 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 RDH12Q96NR8 316 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 ZNF347Q96SE7 839 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 SP140LQ9H930 580 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 SIX3O95343 332 aaPredicted RBP19.11■□□□□ 0.65
USP48-201ENST00000308271 ALDH2P05091 517 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 SYPL2Q5VXT5 272 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 CERS6Q6ZMG9 384 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 IKBIPQ70UQ0 350 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 APOLD1Q96LR9 279 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 HBEGFQ99075 208 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 PIGVQ9NUD9 493 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 ARIH1Q9Y4X5 557 aaPredicted RBP19.11■□□□□ 0.65
USP48-201ENST00000308271 ROBO1Q9Y6N7 1651 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 TNFRSF11BO00300 401 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 STK16O75716 305 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 CCR10P46092 362 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 SRP54P61011 504 aaKnown RBP19.11■□□□□ 0.65
USP48-201ENST00000308271 ZSWIM7Q19AV6 140 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 BRSK1Q8TDC3 778 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 TSPEARQ8WU66 669 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 MARCH7Q9H992 704 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 SIX4Q9UIU6 781 aa19.11■□□□□ 0.65
USP48-201ENST00000308271 BTN3A3O00478 584 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 ADAMDEC1O15204 470 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 OR10H3O60404 316 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 GRK4P32298 578 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 HNF4AP41235 474 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 GOLM1Q8NBJ4 401 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 SUN5Q8TC36 379 aa19.1■□□□□ 0.65
USP48-201ENST00000308271 SPPL2BQ8TCT7 592 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms