RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TCHHL1Q5QJ38 904 aaPredicted RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 C9orf50Q5SZB4 431 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TRIM68Q6AZZ1 485 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GDPD4Q6W3E5 623 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 MACC1Q6ZN28 852 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 USP45Q70EL2 814 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP47-201ENST00000305481 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 OR9I1Q8NGQ6 314 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CCDC124Q96CT7 223 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 ASIC4Q96FT7 647 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 NPAS2Q99743 824 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 EIF2B4Q9UI10 523 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 BTRCQ9Y297 605 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 RWDD3Q9Y3V2 267 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TIMM22Q9Y584 194 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CIB2O75838 187 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 TRIM16O95361 564 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 LINC00032P0C843 101 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 VIPR2P41587 438 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 SLC34A1Q06495 639 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 DMC1Q14565 340 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 DHCR24Q15392 516 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 TLDC1Q6P9B6 456 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 RNF111Q6ZNA4 994 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 C12orf40Q86WS4 652 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 FUNDC1Q8IVP5 155 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 PLPP6Q8IY26 295 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 CFAP61Q8NHU2 1237 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.46□□□□□ -1.37
USP47-201ENST00000305481 ZNF570Q96NI8 536 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 MYCBPQ99417 103 aaPredicted RBP6.46□□□□□ -1.37
USP47-201ENST00000305481 HGH1Q9BTY7 390 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 HTATIP2Q9BUP3 242 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 CD274Q9NZQ7 290 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 CRLS1Q9UJA2 301 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 GNPTGQ9UJJ9 305 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 MRPS23Q9Y3D9 190 aaKnown RBP6.46□□□□□ -1.37
USP47-201ENST00000305481 ST14Q9Y5Y6 855 aa6.46□□□□□ -1.37
USP47-201ENST00000305481 OTOL1A6NHN0 477 aaPredicted RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 PSMD12O00232 456 aaPredicted RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 ESRRBO95718 433 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CYP17A1P05093 508 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 RB1P06400 928 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 POLR2EP19388 210 aaKnown RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 GPX3P22352 226 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SPINT3P49223 89 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 PTPN5P54829 565 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SESN3P58005 492 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SQLEQ14534 574 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 TXNDC11Q6PKC3 985 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 AHI1Q8N157 1196 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ST13P5Q8NFI4 369 aaPredicted RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 OR52B6Q8NGF0 335 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 STMN2Q93045 179 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CDRT15Q96T59 188 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ELOVL2Q9NXB9 296 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CCDC167Q9P0B6 97 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CD84Q9UIB8 345 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 PPM1HQ9ULR3 514 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 LRRC42Q9Y546 428 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 PIKFYVEQ9Y2I7 2098 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SPTBN5Q9NRC6 3674 aaKnown RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 IGLV3-16A0A075B6K0 115 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 TAPBPO15533 448 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 LEFTY1O75610 366 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 THOP1P52888 689 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CEACAM7Q14002 265 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 LRP8Q14114 963 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 FASTKQ14296 549 aaKnown RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 PHKG1Q16816 387 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ZNF423Q2M1K9 1284 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 AGKQ53H12 422 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ARSIQ5FYB1 569 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 PIGGQ5H8A4 983 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 LYPLAL1Q5VWZ2 237 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 TMC5Q6UXY8 1006 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 KIRREL3Q8IZU9 778 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ZBTB2Q8N680 514 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 DCBLD1Q8N8Z6 715 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 VN1R2Q8NFZ6 395 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 OTUB2Q96DC9 234 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SLC45A3Q96JT2 553 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ACOX2Q99424 681 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 SLC2A11Q9BYW1 496 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 NSUN3Q9H649 340 aaKnown RBP6.46□□□□□ -1.38
USP47-201ENST00000305481 CERS4Q9HA82 394 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 WDR41Q9HAD4 459 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 EFCAB1Q9HAE3 211 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 POLG2Q9UHN1 485 aa6.46□□□□□ -1.38
USP47-201ENST00000305481 ZNF197O14709 1029 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 SNX2O60749 519 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 GPC4O75487 556 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 POU2F2P09086 479 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PRR35P0CG20 571 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ANPEPP15144 967 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms