RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 GTPBP2Q9BX10 602 aaKnown RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 SAMHD1Q9Y3Z3 626 aaKnown RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 SLIT1O75093 1534 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 A0A1W2PQ67 120 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 HDAC3O15379 428 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 FFAR2O15552 330 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 KDM4BO94953 1096 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 LGALS2P05162 132 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 THRBP10828 461 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TNFAIP8L3Q5GJ75 292 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 C3orf33Q6P1S2 294 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 FBXW8Q8N3Y1 598 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 AVL9Q8NBF6 648 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 NINJ1Q92982 152 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TMEM27Q9HBJ8 222 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CFAP97Q9P2B7 532 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ANXA2P2A6NMY6 339 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 RIIAD1A6NNX1 92 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CCRL2O00421 344 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 PER2O15055 1255 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 PSMG1O95456 288 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ANXA2P07355 339 aaKnown RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 GRIA3P42263 894 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CCINQ13939 588 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 RIOX2Q8IUF8 465 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TCAIMQ8N3R3 496 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 AGXT2Q9BYV1 514 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TM6SF2Q9BZW4 377 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 FAM240BA0A1B0GVZ2 78 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 EPHB6O15197 1021 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 KRT36O76013 467 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ADH1CP00326 375 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 LIPMQ5VYY2 423 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 UNC5AQ6ZN44 842 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 MED28Q9H204 178 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TPK1Q9H3S4 243 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 RNPEPL1Q9HAU8 725 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 PRPF19Q9UMS4 504 aaKnown RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 GNB5O14775 395 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 TFEBP19484 476 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 USP4Q13107 963 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 OR4C6Q8NH72 309 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 AENQ8WTP8 325 aaKnown RBP11.97□□□□□ -0.49
PCF11-201ENST00000298281 ARHGEF4Q9NR80 690 aa11.97□□□□□ -0.49
PCF11-201ENST00000298281 CAPN14A8MX76 684 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 FAM86B1E9PN63 330 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 CST1P01037 141 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 FAM86B2P0C5J1 330 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 RGS6P49758 472 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 SLC13A2Q13183 592 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 FAM153CQ494X1 144 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 BRMS1LQ5PSV4 323 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 RIT1Q92963 219 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ABCD2Q9UBJ2 740 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 H0YGN5 161 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 CHST10O43529 356 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ITGA5P08648 1049 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ALOX5P09917 674 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 NR1H2P55055 460 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 SEC13P55735 322 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 TMEM17Q86X19 198 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 OR52K1Q8NGK4 314 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ACOT12Q8WYK0 555 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 CLP1Q92989 425 aaKnown RBP11.96□□□□□ -0.49
PCF11-201ENST00000298281 TMEM125Q96AQ2 219 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 RNF157Q96PX1 679 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 ZNF649Q9BS31 505 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 MTRRQ9UBK8 725 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 KCNS2Q9ULS6 477 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 PLD2O14939 933 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 AP2A2O94973 939 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 KLRK1P26718 216 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 PPP3CAQ08209 521 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 INAVAQ3KP66 663 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 SLC41A1Q8IVJ1 513 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 LAS2Q8IYD9 372 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 DNAJB14Q8TBM8 379 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 SEC14L3Q9UDX4 400 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 LINGO3P0C6S8 592 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 AFF1P51825 1210 aaKnown RBP11.96□□□□□ -0.49
PCF11-201ENST00000298281 ARPC4P59998 168 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 FOXK1P85037 733 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 CELF3Q5SZQ8 465 aaKnown RBP11.96□□□□□ -0.49
PCF11-201ENST00000298281 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
PCF11-201ENST00000298281 GJD3Q8N144 294 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 RIPOR3Q96MK2 946 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 NELFAQ9H3P2 528 aa11.96□□□□□ -0.49
PCF11-201ENST00000298281 PNO1Q9NRX1 252 aaKnown RBP11.96□□□□□ -0.49
PCF11-201ENST00000298281 SSR2P43308 183 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms