RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NCBP2-AS2Q69YL0 99 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 ADGRD1Q6QNK2 874 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 HDDC2Q7Z4H3 204 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 GDPD5Q8WTR4 605 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 RIOK2Q9BVS4 552 aaKnown RBP17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 PCDHGA11Q9Y5H2 935 aa17.53■□□□□ 0.4
CDC42EP3-201ENST00000295324 FFAR2O15552 330 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 TNFP01375 233 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 NT5EP21589 574 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 CHRNA4P43681 627 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 MAPK12P53778 367 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ANGPT1Q15389 498 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 TMEM164Q5U3C3 297 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ANKLE1Q8NAG6 615 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 SMG8Q8ND04 991 aaKnown RBP17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 BHLHE22Q8NFJ8 381 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 RBM18Q96H35 190 aaKnown RBP17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 GPR62Q9BZJ7 368 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 TRPS1Q9UHF7 1281 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ARFGEF2Q9Y6D5 1785 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 TRIM38O00635 465 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 TIMP1P01033 207 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ACP5P13686 325 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 BMPR1AP36894 532 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 WDR45BQ5MNZ6 344 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 CYP2S1Q96SQ9 504 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 NPY6RQ99463 290 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 FNDC11Q9BVV2 318 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 PNPOQ9NVS9 261 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ANXA4P09525 319 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 ACVRL1P37023 503 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 GRIA3P42263 894 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 GTF2H2Q13888 395 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 GTF2H2CQ6P1K8 395 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 C19orf60Q96EN9 201 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 MAFFQ9ULX9 164 aa17.52■□□□□ 0.4
CDC42EP3-201ENST00000295324 BBIP1A8MTZ0 92 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 MYL12BO14950 172 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 FAM155BO75949 473 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 TALDO1P37837 337 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 CDC42P60953 191 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 TNK2Q07912 1038 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 C16orf72Q14CZ0 275 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 C22orf39Q6P5X5 142 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 CRELD2Q6UXH1 353 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZYG11AQ6WRX3 759 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLITRK2Q9H156 845 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 ABI3Q9P2A4 366 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 ADAM30Q9UKF2 790 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 H0YC42 278 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 HCRTO43612 131 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 IGFALSP35858 605 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC44A4Q53GD3 710 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 ARMC8Q8IUR7 673 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 SAMD14Q8IZD0 417 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZNF366Q8N895 744 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 TERB1Q8NA31 727 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 SIDT2Q8NBJ9 832 aaKnown RBP17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 RNFT2Q96EX2 444 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 MIPEPQ99797 713 aa17.52■□□□□ 0.39
CDC42EP3-201ENST00000295324 CCDC162PA2VCL2 907 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 DLDP09622 509 aaKnown RBP17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 IL1R2P27930 398 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 AVPR1BP47901 424 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 MRPS22P82650 360 aaKnown RBP17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 SEMG2Q02383 582 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 DHDDSQ86SQ9 333 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 MTRRQ9UBK8 725 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 CIDEBQ9UHD4 219 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 LYVE1Q9Y5Y7 322 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 ARL5AQ9Y689 179 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 PDE4DIPQ5VU43 2346 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 FAM58BPP0C7Q3 252 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 PSMB9P28065 219 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 LRRTM4Q86VH4 590 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 IFNLR1Q8IU57 520 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 KDELR3O43731 214 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 HOXB6P17509 224 aaKnown RBP17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 OFCC1Q8IZS5 231 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 GTPBP2Q9BX10 602 aaKnown RBP17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 ITM2CQ9NQX7 267 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 DIABLOQ9NR28 239 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 MAT2BQ9NZL9 334 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 MASP1P48740 699 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC25A3Q00325 362 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 EML3Q32P44 896 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 AMZ1Q400G9 498 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 FAM129CQ86XR2 697 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC35B2Q8TB61 432 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 GSDMCQ9BYG8 508 aa17.51■□□□□ 0.39
CDC42EP3-201ENST00000295324 IGKV6-21A0A0C4DH24 114 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 CNMDO75829 334 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SMYD5Q6GMV2 418 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms