RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 FN3KQ9H479 309 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 GSKIPQ9P0R6 139 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
SLX4-201ENST00000294008 CNOT4O95628 575 aaKnown RBP12.34□□□□□ -0.43
SLX4-201ENST00000294008 CALCAP01258 141 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 ACRP10323 421 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 PKP4Q99569 1192 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 TREM1Q9NP99 234 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 ZNF221Q9UK13 617 aa12.34□□□□□ -0.43
SLX4-201ENST00000294008 PTPRKQ15262 1439 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 METP08581 1390 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 WFS1O76024 890 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 CAMTA2O94983 1202 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 MLYCDO95822 493 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 RAB4BP61018 213 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.43
SLX4-201ENST00000294008 COL9A2Q14055 689 aaPredicted RBP12.33□□□□□ -0.43
SLX4-201ENST00000294008 UBXN11Q5T124 520 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 CYB5D1Q6P9G0 228 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 XKRXQ6PP77 449 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 OXR1Q8N573 874 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 METTL27Q8N6F8 245 aaPredicted RBP12.33□□□□□ -0.43
SLX4-201ENST00000294008 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 GTPBP3Q969Y2 492 aaKnown RBP12.33□□□□□ -0.43
SLX4-201ENST00000294008 MED28Q9H204 178 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 RRN3Q9NYV6 651 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 MAU2Q9Y6X3 613 aa12.33□□□□□ -0.43
SLX4-201ENST00000294008 ISPDA4D126 451 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 CDK14O94921 469 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CDC25CP30307 473 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 RGS21Q2M5E4 152 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 FRS2Q8WU20 508 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 FUT8Q9BYC5 575 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ALG2Q9H553 416 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 C17orf75Q9HAS0 396 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 REM1O75628 298 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 PLA2G16P53816 162 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 PLP2Q04941 152 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 SLC10A7Q0GE19 358 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 NFATC1O95644 943 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 OTCP00480 354 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ATF4P18848 351 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 SLC6A3Q01959 620 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 EVLQ9UI08 416 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 ZNF536O15090 1300 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 A0A1W2PPL8 197 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ZBTB22O15209 634 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 SYNGR4O95473 234 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 MT-CYBP00156 380 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 GNRHRP30968 328 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 SLC15A2Q16348 729 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ARHGAP40Q5TG30 622 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 TMED8Q6PL24 325 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 TMPPEQ6ZT21 453 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 GPAT4Q86UL3 456 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 OR8H3Q8N146 312 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CD300LFQ8TDQ1 290 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 DGAT2Q96PD7 388 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 TRMT61BQ9BVS5 477 aaKnown RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 CAPN14A8MX76 684 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CHST10O43529 356 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 SNAP91O60641 907 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ADSSP30520 456 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 MAPK12P53778 367 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 E2F2Q14209 437 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CA9Q16790 459 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 KHDC1LQ5JSQ8 128 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ZNF782Q6ZMW2 699 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 KATNAL2Q8IYT4 538 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ZBTB45Q96K62 511 aaPredicted RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 COPS8Q99627 209 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ZNF649Q9BS31 505 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
SLX4-201ENST00000294008 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
SLX4-201ENST00000294008 NPIPA5E9PKD4 350 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 RPL14P50914 215 aaKnown RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 NRLP54845 237 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 OR12D2P58182 307 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 PLEKHG4Q58EX7 1191 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ANKZF1Q9H8Y5 726 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms