RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RFTN2Q52LD8 501 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 C6orf136Q5SQH8 315 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 GPSM1Q86YR5 675 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 ATP6V0D2Q8N8Y2 350 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 OR10A6Q8NH74 314 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 PROKR1Q8TCW9 393 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 SEPT8Q92599 483 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 TMBIM1Q969X1 311 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 NSMCE2Q96MF7 247 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 CINPQ9BW66 212 aaPredicted RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 SMPD4Q9NXE4 827 aa9.03□□□□□ -0.96
MSH4-201ENST00000263187 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
MSH4-201ENST00000263187 ZNF236Q9UL36 1845 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 AQP12BA6NM10 295 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 M0QZQ0 153 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 KERAO60938 352 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 RASAL1O95294 804 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 WISP3O95389 354 aaPredicted RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 BMP10O95393 424 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 ASGR1P07306 291 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 SLC2A4P14672 509 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 GKP32189 559 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 MAPRE1Q15691 268 aaKnown RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 MEP1AQ16819 746 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 VARS2Q5ST30 1063 aaKnown RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 CST9Q5W186 159 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 LCN8Q6JVE9 175 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 BORAQ6PGQ7 559 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 MBOAT1Q6ZNC8 495 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 GPRIN3Q6ZVF9 776 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 FRA10AC1Q70Z53 315 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 GALNT10Q86SR1 603 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 ANKRD46Q86W74 232 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 AQP12AQ8IXF9 295 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 ZNF683Q8IZ20 524 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 SFRP1Q8N474 314 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 KRTCAP2Q8N6L1 136 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 HM13Q8TCT9 377 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 GFM2Q969S9 779 aaKnown RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 NCLNQ969V3 563 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 KIAA1191Q96A73 305 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 FEM1CQ96JP0 617 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 BTN2A3PQ96KV6 586 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 SUSD3Q96L08 255 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 SEZ6LQ9BYH1 1024 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 TMEM165Q9HC07 324 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 PCDH12Q9NPG4 1184 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 LIMD1Q9UGP4 676 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 AFF4Q9UHB7 1163 aaKnown RBP9.02□□□□□ -0.96
MSH4-201ENST00000263187 VPS4AQ9UN37 437 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 SQORQ9Y6N5 450 aa9.02□□□□□ -0.96
MSH4-201ENST00000263187 A0A1W2PQ67 120 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 BBIP1A8MTZ0 92 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ARVCFO00192 962 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 GSTA4O15217 222 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 SNAP91O60641 907 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 PAPSS2O95340 614 aaPredicted RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 ALPIP09923 528 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 CYP4B1P13584 511 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 HSD17B1P14061 328 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 AGXTP21549 392 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 FSHRP23945 695 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 DNAJB1P25685 340 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 CTGFP29279 349 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 MTHFRP42898 656 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 HSPA7P48741 367 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 ABRAXAS2Q15018 415 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TMTC4Q5T4D3 741 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 RSPO2Q6UXX9 243 aaPredicted RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 Q6ZSR9 355 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 GALNT5Q7Z7M9 940 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ZUFSPQ96AP4 578 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 NSUN3Q9H649 340 aaKnown RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 AIG1Q9NVV5 245 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 PKD2L2Q9NZM6 624 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 FAM8A1Q9UBU6 413 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 PCTPQ9UKL6 214 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 PADI4Q9UM07 663 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TCRBV5S2A0A599 114 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 H0Y626 953 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ZNF189O75820 626 aaPredicted RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 TRIM16O95361 564 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 GJB5O95377 273 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 C1QCP02747 245 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 CYP11A1P05108 521 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 FGF4P08620 206 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TACR2P21452 398 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 ZFP36L2P47974 494 aaKnown RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 HUNKP57058 714 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 GALNT1Q10472 559 aaPredicted RBP9.02□□□□□ -0.97
MSH4-201ENST00000263187 BNIP2Q12982 314 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 RCAN2Q14206 197 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 AP5B1Q2VPB7 878 aa9.02□□□□□ -0.97
MSH4-201ENST00000263187 TMEM199Q8N511 208 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms