RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 NOMO1Q15155 1222 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 CCNG2Q16589 344 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 DEFB109BQ30KR1 87 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 RAET1GQ6H3X3 334 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 C8orf74Q6P047 294 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 Q6ZVL8 140 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 B4GALNT4Q76KP1 1039 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 MARK2Q7KZI7 788 aaKnown RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 BZW1Q7L1Q6 419 aaKnown RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 GSTA5Q7RTV2 222 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 CDKL3Q8IVW4 592 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 ATPAF2Q8N5M1 289 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 LZTR1Q8N653 840 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 CCNYQ8ND76 341 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 LRRN4CLQ8ND94 238 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 SLC37A2Q8TED4 501 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 GRK7Q8WTQ7 553 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 RTP4Q96DX8 246 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 SLC45A3Q96JT2 553 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 FRMD8P1Q9BZ68 369 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 GPN2Q9H9Y4 310 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 TRNAU1APQ9NX07 287 aaKnown RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 CD84Q9UIB8 345 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 TUBD1Q9UJT1 453 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF148Q9UQR1 794 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 TMEM98Q9Y2Y6 226 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 USP9YO00507 2555 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 NPIPB15A6NHN6 443 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 MTSS1O43312 755 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 SOD1P00441 154 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CPP00450 1065 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 RBP3P10745 1247 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CTPS1P17812 591 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 MX2P20592 715 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 COILP38432 576 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 KCNJ1P48048 391 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 FNTAP49354 379 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 MAXP61244 160 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 AP1B1Q10567 949 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 SLC10A2Q12908 348 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 TRAF2Q12933 501 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 PPP1R7Q15435 360 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CLPPQ16740 277 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 DCAF12Q5T6F0 453 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 C16orf46Q6P387 395 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 TTC27Q6P3X3 843 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 TMEM71Q6P5X7 295 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CCDC137Q6PK04 289 aaKnown RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 NLGN4XQ8N0W4 816 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 PGBD5Q8N414 524 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 NLGN4YQ8NFZ3 816 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 RUNDC3BQ96NL0 473 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 CATSPER2Q96P56 530 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 QKIQ96PU8 341 aaKnown RBP eCLIP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 PSMG3-AS1Q96PY0 264 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 OR2M4Q96R27 311 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 FERMT1Q9BQL6 677 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 SPRY4Q9C004 299 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 C10orf88Q9H8K7 445 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 DNPEPQ9ULA0 475 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 TP53TG5Q9Y2B4 290 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 SLC17A4Q9Y2C5 497 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 PRKAB1Q9Y478 270 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 TEX15Q9BXT5 2789 aa9.93□□□□□ -0.82
PHGDH-222ENST00000641587 USP9XQ93008 2570 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 SPTAN1Q13813 2472 aaKnown RBP9.93□□□□□ -0.82
PHGDH-222ENST00000641587 PRR19A6NJB7 356 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 HACD1B0YJ81 288 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 B4E171 279 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 KCNN4O15554 427 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 HTRA2O43464 458 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 STK17BO94768 372 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 STK10O94804 968 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 GAS8O95995 478 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 IFNB1P01574 187 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 NTRK1P04629 796 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 IVLP07476 585 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 RHOXF2BP0C7M4 288 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 F8A1P23610 371 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 GARSP41250 739 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 TSPAN7P41732 249 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 AP1S1P61966 158 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 POLR2LP62875 67 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 DR1Q01658 176 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 IL10RBQ08334 325 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 NSUN2Q08J23 767 aaKnown RBP eCLIP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 GALNT2Q10471 571 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 XRCC4Q13426 336 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 LBRQ14739 615 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 LACTB2Q53H82 288 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 CBARPQ8N350 705 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 MMGT1Q8N4V1 131 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms