RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ELFN1P0C7U0 828 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 KITP10721 976 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ACADSP16219 412 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 TFEBP19484 476 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ITGB7P26010 798 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ACRV1P26436 265 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ADSLP30566 484 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 AKT1P31749 480 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 SLC1A6P48664 564 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 METAP1P53582 386 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ASPHQ12797 758 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF284Q2VY69 593 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 GPR33Q49SQ1 333 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 CTSL3PQ5NE16 218 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 SDE2Q6IQ49 451 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 UGT3A1Q6NUS8 523 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PAQR3Q6TCH7 311 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ZYG11AQ6WRX3 759 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 DPPA4Q7L190 304 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 HSD11B1LQ7Z5J1 315 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 NET1Q7Z628 596 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ADGRG6Q86SQ4 1221 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 KIRREL3Q8IZU9 778 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 RBFAQ8N0V3 343 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF513Q8N8E2 541 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 SIDT2Q8NBJ9 832 aaKnown RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 HCAR2Q8TDS4 363 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ANKRD49Q8WVL7 239 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 MCUR1Q96AQ8 359 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ULK4Q96C45 1275 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PLEKHG4BQ96PX9 1271 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 C19orf43Q9BQ61 176 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 MRPL57Q9BQC6 102 aaKnown RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 CCDC106Q9BWC9 280 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 NMUR2Q9GZQ4 415 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ABCG8Q9H221 673 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 TMEM245Q9H330 911 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 FAM83DQ9H4H8 585 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ALG9Q9H6U8 611 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 POPDC3Q9HBV1 291 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PRSS16Q9NQE7 514 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 RAD18Q9NS91 495 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 TAS2R1Q9NYW7 299 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 STX18Q9P2W9 335 aaKnown RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 LIMD1Q9UGP4 676 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 GNPTGQ9UJJ9 305 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ITM2BQ9Y287 266 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 MTF2Q9Y483 593 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 PCDHB1Q9Y5F3 818 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 BRWD1Q9NSI6 2320 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 CDH23Q9H251 3354 aa8.77□□□□□ -1.01
PHGDH-219ENST00000641513 ZFC3H1O60293 1989 aaKnown RBP8.77□□□□□ -1.01
PHGDH-219ENST00000641513 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 IQCF5A8MTL0 148 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 A8MUI8 341 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 C2CD4DB7Z1M9 353 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ANHXE9PGG2 379 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SPECC1L-ADORA2AF8WAN1 911 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SLCO1B7G3V0H7 640 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ARNTLO00327 626 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 GAPDHSO14556 408 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 RNASEH1O60930 286 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SMIM24O75264 130 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 LYPLA1O75608 230 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TM7SF2O76062 418 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TRIM16O95361 564 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 POU3F3P20264 500 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ATP6V1C1P21283 382 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CA5AP35218 305 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SERPINB5P36952 375 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 MMP12P39900 470 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ETV3P41162 512 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TNFRSF4P43489 277 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ABCE1P61221 599 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ELP6Q0PNE2 266 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 RALGDSQ12967 914 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SMAD4Q13485 552 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TUBB3Q13509 450 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ACAP2Q15057 778 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 PON2Q15165 354 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 HSF5Q4G112 596 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 ATP13A5Q4VNC0 1218 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 C2orf27AQ580R0 203 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TECRLQ5HYJ1 363 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CFAP157Q5JU67 520 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 SH2D4BQ5SQS7 431 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 C6orf163Q5TEZ5 329 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 FAM46CQ5VWP2 391 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 LIPMQ5VYY2 423 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 AAGABQ6PD74 315 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 TMEM207Q6UWW9 146 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 Q6ZVL8 140 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 NXPE1Q8N323 547 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 NKAPQ8N5F7 415 aaKnown RBP8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CCNYL1Q8N7R7 359 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 CXorf40AQ8TE69 158 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 GANCQ8TET4 914 aa8.76□□□□□ -1.01
PHGDH-219ENST00000641513 NAT14Q8WUY8 206 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms