RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DGKGP49619 791 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLCQ05315 142 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 UGT3A2Q3SY77 523 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 LYPLAL1Q5VWZ2 237 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 PELI3Q8N2H9 469 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 VN1R2Q8NFZ6 395 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ACTRT2Q8TDY3 377 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 OSCP1Q8WVF1 389 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZFYVE19Q96K21 471 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 SAMD11Q96NU1 681 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 HEPHQ9BQS7 1158 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 RNPEPL1Q9HAU8 725 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 SEMA4BQ9NPR2 832 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 CD274Q9NZQ7 290 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 WASF2Q9Y6W5 498 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 A0A1B0GTL3 188 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 KLK8O60259 260 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 LEFTY1O75610 366 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 SLC25A14O95258 325 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 CISD3P0C7P0 127 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ITGAXP20702 1163 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 FOXA1P55317 472 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ATP13A5Q4VNC0 1218 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 KHDC1Q4VXA5 237 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ARSIQ5FYB1 569 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ANKS6Q68DC2 871 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 PLPP6Q8IY26 295 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 CLYBLQ8N0X4 340 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZNF366Q8N895 744 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ESAMQ96AP7 390 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ASB2Q96Q27 587 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 KCNA7Q96RP8 456 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 ANKRD12Q6UB98 2062 aa17.15■□□□□ 0.34
PCDHGC3-205ENST00000617641 A0A088AWK7 358 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 RGSL1A5PLK6 1076 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 RPS17P08708 135 aaKnown RBP17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 THRAP10827 490 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 NNMTP40261 264 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 MESP2Q0VG99 397 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 ACSBG2Q5FVE4 666 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 FAM78AQ5JUQ0 283 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 C3orf30Q96M34 536 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 RTKNQ9BST9 563 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 HTATIP2Q9BUP3 242 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZBTB26Q9HCK0 441 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 GEMIN8Q9NWZ8 242 aaKnown RBP17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 CD84Q9UIB8 345 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 C2orf16Q68DN1 1984 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 ATP6AP2A0A1C7CYW4 349 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 AGAP14A8MT82 685 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 H0Y3Z8 333 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 STX16-NPEPL1H3BU86 382 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 STX16O14662 325 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 SLC22A2O15244 555 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 SNX2O60749 519 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 ATP6AP2O75787 350 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 PTPN5P54829 565 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 LCP2Q13094 533 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 TGFBIQ15582 683 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 DUSP6Q16828 381 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 MACC1Q6ZN28 852 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 NPAS3Q8IXF0 933 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 KIRREL3Q8IZU9 778 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 C19orf60Q96EN9 201 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 PDLIM5Q96HC4 596 aaKnown RBP17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 PLEKHG4BQ96PX9 1271 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 APOL5Q9BWW9 433 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 SLC7A8Q9UHI5 535 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 ASB1Q9Y576 335 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 DNAJC15Q9Y5T4 150 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 PTGDR2Q9Y5Y4 395 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 PLXNB3Q9ULL4 1909 aa17.14■□□□□ 0.33
PCDHGC3-205ENST00000617641 AZIN1O14977 448 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 ADH1CP00326 375 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 CTSLP07711 333 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 FGF4P08620 206 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 SPINT3P49223 89 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 POLR2LP62875 67 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 POM121L1PQ3SYA9 428 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 BRAT1Q6PJG6 821 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 CHSY3Q70JA7 882 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 DEFB107AQ8IZN7 70 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 GDPD5Q8WTR4 605 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 EBF3Q9H4W6 596 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 PCTPQ9UKL6 214 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 A0A1W2PQ67 120 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 AIM2O14862 343 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 HOXC11O43248 304 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 TULP3O75386 442 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 EZRP15311 586 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 ADSLP30566 484 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 KANK2Q63ZY3 851 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 TXNDC11Q6PKC3 985 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 SBSNQ6UWP8 590 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 RP9Q8TA86 221 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZNF483Q8TF39 744 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 TWIST2Q8WVJ9 160 aa17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZDHHC3Q9NYG2 299 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms