RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 CPXM1Q96SM3 734 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 APOL4Q9BPW4 351 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 ADI1Q9BV57 179 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 ACAT2Q9BWD1 397 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 NT5C1AQ9BXI3 368 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 EMILIN2Q9BXX0 1053 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 ZNF717Q9BY31 904 aaPredicted RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 GPR62Q9BZJ7 368 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 OR51B5Q9H339 312 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 TRIT1Q9H3H1 467 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 ATP13A3Q9H7F0 1226 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 GOLGA2P5Q9HBQ8 144 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 MRM3Q9HC36 420 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 NGRNQ9NPE2 291 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 ANLNQ9NQW6 1124 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 CHST12Q9NRB3 414 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 SEPT11Q9NVA2 429 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 DMAC2Q9NW81 257 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 DUS2Q9NX74 493 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 SLC39A1Q9NY26 324 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 B3GNT2Q9NY97 397 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 TAS2R7Q9NYW3 318 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 KLHL42Q9P2K6 505 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 MTRRQ9UBK8 725 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 HMGXB4Q9UGU5 601 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 DCDC2Q9UHG0 476 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 ATP6V1HQ9UI12 483 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 ZNF229Q9UJW7 825 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 SARDHQ9UL12 918 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 RBMX2Q9Y388 322 aaKnown RBP5.05□□□□□ -1.6
SSX9-202ENST00000608568 PCDHGB1Q9Y5G3 927 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 IRAK3Q9Y616 596 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 NUMA1Q14980 2115 aa5.05□□□□□ -1.6
SSX9-202ENST00000608568 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 CNTNAP2Q9UHC6 1331 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PNMA8CA0A1B0GUJ8 204 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PRR23AA6NEV1 266 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 TRPC5OSA6NMA1 111 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 OR5K4A6NMS3 321 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 E5RJQ4 531 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 H7C0C1 242 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 RAD51BO15315 384 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ARHGEF9O43307 516 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PI15O43692 258 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 KCNJ13O60928 360 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ZNF254O75437 659 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 KATNA1O75449 491 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 RNASEH2AO75792 299 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 SERPINI2O75830 405 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 GABARAPO95166 117 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 TRIM16O95361 564 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 NADKO95544 446 aaPredicted RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 WDPCPO95876 746 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PRLP01236 227 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 SOD2P04179 222 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 URODP06132 367 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 CAPN1P07384 714 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 UMPSP11172 480 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 RALAP11233 206 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 HOXB8P17481 243 aaPredicted RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 HOXB6P17509 224 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 PRKACAP17612 351 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 MX2P20592 715 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 CES1P23141 567 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PIK3R1P27986 724 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 EPHA3P29320 983 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ERP29P30040 261 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 UGT2B10P36537 528 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 CAPGP40121 348 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 GP5P40197 560 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 EIF2DP41214 584 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 RPS5P46782 204 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 SOX9P48436 509 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 SLC1A6P48664 564 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 RPIAP49247 311 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ALDH7A1P49419 539 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 GLUD2P49448 558 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 IDH3AP50213 366 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ZNF135P52742 658 aaPredicted RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 SLC12A3P55017 1021 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 EIF3EP60228 445 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 CYP4F2P78329 520 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 GALK2Q01415 458 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 OTUD4Q01804 1114 aaKnown RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 SOX4Q06945 474 aaPredicted RBP5.04□□□□□ -1.6
SSX9-202ENST00000608568 CYP4F3Q08477 520 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 GPS1Q13098 491 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 STX5Q13190 355 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ART3Q13508 389 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 GK3PQ14409 553 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 INPP5AQ14642 412 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ACAP2Q15057 778 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ACOX1Q15067 660 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 TAF5Q15542 800 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 PCSK7Q16549 785 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 ZFP69Q49AA0 526 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 YIF1BQ5BJH7 314 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.04□□□□□ -1.6
SSX9-202ENST00000608568 ZFYVE27Q5T4F4 411 aa5.04□□□□□ -1.6
SSX9-202ENST00000608568 MROH9Q5TGP6 573 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms