RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	PLD2	O14939	933 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	ZW10	O43264	779 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	SNX2	O60749	519 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	SLC2A4	P14672	509 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	ITPKB	P27987	946 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	RBMS1	P29558	406 aa	Known RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	PCBP4	P57723	403 aa	Known RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	EIF3I	Q13347	325 aa	Known RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	SQSTM1	Q13501	440 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	KIR2DS5	Q14953	304 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	INSC	Q1MX18	579 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	LDLRAP1	Q5SW96	308 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	GPRC6A	Q5T6X5	926 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF574	Q6ZN55	896 aa	Predicted RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	USP53	Q70EK8	1073 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	CLEC14A	Q86T13	490 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	PIM3	Q86V86	326 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF761	Q86XN6	746 aa	Predicted RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	OR13C4	Q8NGS5	318 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	ALS2CR12	Q96Q35	445 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	OSGEPL1	Q9H4B0	414 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	SARS2	Q9NP81	518 aa	Known RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	PRDM8	Q9NQV8	689 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	KCNK4	Q9NYG8	393 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	FEZ2	Q9UHY8	353 aa	Predicted RBP	15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	NBEA	Q8NFP9	2946 aa		15.26	■□□□□ 0.03
PLD3-223	ENST00000600948	LAMA5	O15230	3695 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	PIKFYVE	Q9Y2I7	2098 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	OR5K4	A6NMS3	321 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	RRP8	O43159	456 aa	Known RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	TNFSF15	O95150	251 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	PRAMEF1	O95521	474 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	CRTAM	O95727	393 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ITGA2B	P08514	1039 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	HGF	P14210	728 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	CSF2RB	P32927	897 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ABCG1	P45844	678 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF140	P52738	457 aa	Predicted RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	GPLD1	P80108	840 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	XIAP	P98170	497 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	HHEX	Q03014	270 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	CFHR1	Q03591	330 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	CCDC173	Q0VFZ6	552 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	GTF2H3	Q13889	308 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	SIX1	Q15475	284 aa	Predicted RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	P3H1	Q32P28	736 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	NKAIN2	Q5VXU1	208 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	LRRC69	Q6ZNQ3	347 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	SLC9B2	Q86UD5	537 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	TRAPPC5	Q8IUR0	188 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	FBXO39	Q8N4B4	442 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	RASGEF1A	Q8N9B8	481 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF248	Q8NDW4	579 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF398	Q8TD17	642 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	C1orf54	Q8WWF1	131 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	LRRC45	Q96CN5	670 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	C19orf43	Q9BQ61	176 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	TLR10	Q9BXR5	811 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	ZCCHC2	Q9C0B9	1178 aa	Known RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	LRRC40	Q9H9A6	602 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	GRPEL1	Q9HAV7	217 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	SCHIP1	Q9P0W5	487 aa	Predicted RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	FKBPL	Q9UIM3	349 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	RALY	Q9UKM9	306 aa	Known RBP	15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	DNAJC16	Q9Y2G8	782 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	PPP2R2C	Q9Y2T4	447 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	LOXL2	Q9Y4K0	774 aa		15.25	■□□□□ 0.03
PLD3-223	ENST00000600948	IGHV5-10-1	A0A0J9YXX1	117 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	LDB2	O43679	373 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	NRDC	O43847	1150 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	SRP72	O76094	671 aa	Known RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	AP2A1	O95782	977 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	HOXB3	P14651	431 aa	Predicted RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	STIP1	P31948	543 aa	Known RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	CTSC	P53634	463 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	UBE2I	P63279	158 aa	Known RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	PDE1B	Q01064	536 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	C16orf72	Q14CZ0	275 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	PHF19	Q5T6S3	580 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	TAB3	Q8N5C8	712 aa	Predicted RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	TRIM58	Q8NG06	486 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	TMEM159	Q96B96	161 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	CRELD1	Q96HD1	420 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	TTC25	Q96NG3	672 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	SLC38A3	Q99624	504 aa		15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	STN1	Q9H668	368 aa	Known RBP	15.24	■□□□□ 0.03
PLD3-223	ENST00000600948	ZFHX4	Q86UP3	3567 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	AGAP14	A8MT82	685 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	PSMD3	O43242	534 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	BRAF	P15056	766 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	ETV5	P41161	510 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	LIMK2	P53671	638 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	TMPRSS15	P98073	1019 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	NFATC2	Q13469	925 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	ABRAXAS1	Q6UWZ7	409 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	WASH2P	Q6VEQ5	465 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	SPACA3	Q8IXA5	215 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	AVL9	Q8NBF6	648 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	OR4D9	Q8NGE8	314 aa		15.23	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms