RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 KLC4Q9NSK0 619 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 HACD3Q9P035 362 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
LIG1-212ENST00000596549 KIR2DS5A0A0G2JLQ3 304 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 A0A0G2JNG1 304 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 KIR2DS3K7RE56 304 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 KCNN4O15554 427 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 EFSO43281 561 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 FTCDO95954 541 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 AGTP01019 485 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 FGF3P11487 239 aaPredicted RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 BRAFP15056 766 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ZNF7P17097 686 aaPredicted RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 GEMP55040 296 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.353e-6■□□□□ 10
LIG1-212ENST00000596549 KIR2DS5Q14953 304 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 CHRNA6Q15825 494 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 ANKRD20A2Q5SQ80 823 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 CCDC181Q5TID7 509 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ANKRD20A1Q5TYW2 823 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ANKRD20A3Q5VUR7 823 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 TMEM71Q6P5X7 295 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 MICALCLQ6ZW33 695 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 KLHDC8BQ8IXV7 354 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 BMPERQ8N8U9 685 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 CCDC110Q8TBZ0 833 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 DTX3LQ8TDB6 740 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 TTC9Q92623 222 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 SPATA13Q96N96 652 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 TBC1D10AQ9BXI6 508 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 CPNE7Q9UBL6 633 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 DNAJC16Q9Y2G8 782 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 ARL5AQ9Y689 179 aa12.86□□□□□ -0.35
LIG1-212ENST00000596549 MN1Q10571 1320 aaPredicted RBP12.86□□□□□ -0.35
LIG1-212ENST00000596549 GLYATL1P3A0A0U1RQE8 302 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 LILRA5A6NI73 299 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 KMOO15229 486 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 ZW10O43264 779 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A9O60656 530 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 CDK14O94921 469 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 SLC2A4P14672 509 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A6P19224 532 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A1P22309 533 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A4P22310 534 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A3P35503 534 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 CTSCP53634 463 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 EPHA4P54764 986 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
LIG1-212ENST00000596549 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 ITPRIPL1Q6GPH6 555 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 SLC9B2Q86UD5 537 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 OR10G6Q8NH81 332 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 SMOXQ9NWM0 555 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 OCIAD1Q9NX40 245 aa12.85□□□□□ -0.35
LIG1-212ENST00000596549 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
LIG1-212ENST00000596549 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 OR52A4PA6NMU1 304 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 ANXA9O76027 345 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 TJP3O95049 919 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 PRAMEF1O95521 474 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 WT1P19544 449 aaPredicted RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 RPL10P27635 214 aaKnown RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 SLC19A1P41440 591 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 MAPK9P45984 424 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 GDF10P55107 478 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 GFERP55789 205 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 TMEM115Q12893 351 aaPredicted RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 ZDHHC20Q5W0Z9 365 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 DENND5AQ6IQ26 1287 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
LIG1-212ENST00000596549 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
LIG1-212ENST00000596549 XKR5Q6UX68 686 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms